RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Source Organism Taxonomy Name (Full Lineage) = "Lactococcus lactis"

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 244 Structures.

Refinements

Structure Determination Methodology

experimental (244)

Scientific Name of Source Organism

	Lactococcus lactis (136)
	Lactococcus lactis subsp. lactis Il1403 (63)
	Lactococcus lactis subsp. lactis (45)
	Lactococcus lactis subsp. lactis KF147 (4)
	Escherichia coli (1)
	Escherichia coli BL21 (1)
	Lactococcus cremoris (1)
	Lactococcus lactis subsp. lactis CV56 (1)
	Monarthropalpus flavus (1)
	unidentified (1)

Taxonomy

	Bacteria (244)
	Eukaryota (1)
	unclassified sequences (1)

Experimental Method

	X-RAY DIFFRACTION (194)
	ELECTRON MICROSCOPY (27)
	SOLUTION NMR (23)
	SOLUTION SCATTERING (1)

Polymer Entity Type

	Protein (238)
	RNA (14)
	DNA (12)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (35)
	1.5 - 2.0 (70)
	2.0 - 2.5 (58)
	2.5 - 3.0 (35)
	3.0 - 3.5 (15)
	3.5 - 4.0 (3)
	4.0 - 4.5 (1)
	> 4.5 (2)

Release Date

	1995 - 1999 (7)
	2000 - 2004 (40)
	2005 - 2009 (37)
	2010 - 2014 (40)
	2015 - 2019 (49)
	2020 - 2024 (69)
	2025 - 2029 (2)

Enzyme Classification Name

	Isomerases (77)
	Oxidoreductases (22)
	Hydrolases (22)
	Transferases (15)
	Ligases (13)
	Translocases (6)
	Lyases (5)

Membrane Protein Annotation

	OPM (7)
	PDBTM (7)
	MemProtMD (6)
	mpstruc (5)

Symmetry Type

	Asymmetric (131)
	Cyclic (95)
	Dihedral (15)
	Tetrahedral (2)

SCOP Classification

	Alpha and beta proteins (a/b) (93)
	Artifacts (27)
	All beta proteins (29)
	All alpha proteins (18)
	Alpha and beta proteins (a+b) (9)
	Small proteins (4)
	Peptides (1)

AllSelected

1 to 25 of 244 Structures

Page 1 of 10

Sort by

Explore in 3D

1DOR \| pdb_00001dor	Download File View File

DIHYDROOROTATE DEHYDROGENASE A FROM LACTOCOCCUS LACTIS

Rowland, P., Larsen, S.

(1997) Structure 5: 239-252

Released	1997-04-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Lactococcus lactis
Macromolecule	DIHYDROOROTATE DEHYDROGENASE A (protein)
Unique Ligands	FMN

Explore in 3D

1E2A \| pdb_00001e2a	Download File View File

ENZYME IIA FROM THE LACTOSE SPECIFIC PTS FROM LACTOCOCCUS LACTIS

Sliz, P., Engelmann, R., Hengstenberg, W., Pai, E.F.

(1997) Structure 5: 775-788

Released	1998-04-29
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Lactococcus lactis
Macromolecule	ENZYME IIA (protein)
Unique Ligands	MG

Explore in 3D

1EP1 \| pdb_00001ep1	Download File View File

CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS DIHYDROOROTATE DEHYDROGENASE B

Rowland, P., Norager, S., Jensen, K.F., Larsen, S.

(2000) Structure 8: 1227-1238

Released	2001-01-17
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Lactococcus lactis
Macromolecule	DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) (protein) DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) (protein)
Unique Ligands	FAD, FES, FMN

Explore in 3D

1EP2 \| pdb_00001ep2	Download File View File

CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS DIHYDROOROTATE DEHYDROGENASE B COMPLEXED WITH OROTATE

Rowland, P., Norager, S., Jensen, K.F., Larsen, S.

(2000) Structure 8: 1227-1238

Released	2001-01-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Lactococcus lactis
Macromolecule	DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) (protein) DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) (protein)
Unique Ligands	FAD, FES, FMN, ORO

Explore in 3D

1EP3 \| pdb_00001ep3	Download File View File

CRYSTAL STRUCTURE OF LACTOCOCCUS LACTIS DIHYDROOROTATE DEHYDROGENASE B. DATA COLLECTED UNDER CRYOGENIC CONDITIONS.

Rowland, P., Norager, S., Jensen, K.F., Larsen, S.

(2000) Structure 8: 1227-1238

Released	2001-01-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Lactococcus lactis
Macromolecule	DIHYDROOROTATE DEHYDROGENASE B (PYRD SUBUNIT) (protein) DIHYDROOROTATE DEHYDROGENASE B (PYRK SUBUNIT) (protein)
Unique Ligands	FAD, FES, FMN

Explore in 3D

1JQV \| pdb_00001jqv	Download File View File

The K213E mutant of Lactococcus lactis Dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Lactococcus lactis
Macromolecule	Dihydroorotate dehydrogenase A (protein)
Unique Ligands	ACY, FMN, MG, ORO

Explore in 3D

1JQX \| pdb_00001jqx	Download File View File

The R57A mutant of Lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, GOL, MG, ORO

Explore in 3D

1JRB \| pdb_00001jrb	Download File View File

The P56A mutant of Lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, ORO

Explore in 3D

1JRC \| pdb_00001jrc	Download File View File

The N67A mutant of Lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, ORO

Explore in 3D

1JUB \| pdb_00001jub	Download File View File

The K136E mutant of lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	FMN, GOL, MG

Explore in 3D

1JUE \| pdb_00001jue	Download File View File

1.8 A resolution structure of native lactococcus lactis dihydroorotate dehydrogenase A

Norager, S., Arent, S., Bjornberg, O., Ottosen, M., Lo Leggio, L., Jensen, K.F., Larsen, S.

(2003) J Biological Chem 278: 28812-28822

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	dihydroorotate dehydrogenase A (protein)
Unique Ligands	ACY, FMN, GOL, MG

Explore in 3D

1KFV \| pdb_00001kfv	Download File View File

Crystal Structure of Lactococcus lactis Formamido-pyrimidine DNA Glycosylase (alias Fpg or MutM) Non Covalently Bound to an AP Site Containing DNA.

Serre, L., Pereira de Jesus, K., Boiteux, S., Zelwer, C., Castaing, B.

(2002) EMBO J 21: 2854-2865

Released	2002-06-14
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Lactococcus lactis
Macromolecule	Formamido-pyrimidine DNA glycosylase (protein) 5'-D(CPTPCPTPTPTP(PDI)PTPTPTPCPTPC)-3' (nucleic acid) 5'-D(GPAPGPAPAPAPCPAPAPAPGPAPG)-3' (nucleic acid)
Unique Ligands	GOL, ZN

Explore in 3D

1L7J \| pdb_00001l7j	Download File View File

X-ray structure of galactose mutarotase from Lactococcus lactis (apo)

Holden, H.M., Thoden, J.B.

(2002) J Biological Chem 277: 20854-20861

Released	2002-04-24
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus lactis
Macromolecule	galactose mutarotase (protein)

Explore in 3D

1L7K \| pdb_00001l7k	Download File View File

x-ray structure of galactose mutarotase from Lactococcus lactis complexed with galactose

Holden, H.M., Thoden, J.B.

(2002) J Biological Chem 277: 20854-20861

Released	2002-04-24
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Lactococcus lactis
Macromolecule	galactose mutarotase (protein)
Unique Ligands	GLA, NA

Explore in 3D

1LNS \| pdb_00001lns	Download File View File

Crystal Structure Analysis of the X-Prolyl Dipeptidyl Aminopeptidase From Lactococcus lactis

Rigolet, P., Mechin, I., Delage, M.M., Chich, J.F.

(2002) Structure 10: 1383-1394

Released	2002-11-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Lactococcus lactis
Macromolecule	X-PROLYL DIPEPTIDYL AMINOPEPTIDASE (protein)

Explore in 3D

1LVH \| pdb_00001lvh	Download File View File

The Structure of Phosphorylated beta-phosphoglucomutase from Lactoccocus lactis to 2.3 angstrom resolution

Lahiri, S.D., Zhang, G., Dunaway-Mariano, D., Allen, K.N.

(2002) Biochemistry 41: 8351-8359

Released	2002-08-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Lactococcus lactis
Macromolecule	beta-phosphoglucomutase (protein)
Unique Ligands	MG

Explore in 3D

1MMU \| pdb_00001mmu	Download File View File

Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-glucose

Thoden, J.B., Kim, J., Raushel, F.M., Holden, H.M.

(2002) J Biological Chem 277: 45458-45465

Released	2002-09-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	Aldose 1-epimerase (protein)
Unique Ligands	BGC, NA

Explore in 3D

1MMX \| pdb_00001mmx	Download File View File

Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-fucose

Thoden, J.B., Kim, J., Raushel, F.M., Holden, H.M.

(2002) J Biological Chem 277: 45458-45465

Released	2002-09-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	Aldose 1-epimerase (protein)
Unique Ligands	FUC, NA

Explore in 3D

1MMY \| pdb_00001mmy	Download File View File

Crystal structure of galactose mutarotase from Lactococcus lactis complexed with D-quinovose

Thoden, J.B., Kim, J., Raushel, F.M., Holden, H.M.

(2002) J Biological Chem 277: 45458-45465

Released	2002-09-18
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Lactococcus lactis
Macromolecule	Aldose 1-epimerase (protein)
Unique Ligands	G6D, NA

Explore in 3D

1MMZ \| pdb_00001mmz	Download File View File

Crystal structure of galactose mutarotase from Lactococcus lactis complexed with L-arabinose

Thoden, J.B., Kim, J., Raushel, R.M., Holden, H.M.

(2002) J Biological Chem 277: 45458-45465

Released	2002-09-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Lactococcus lactis
Macromolecule	Aldose 1-epimerase (protein)
Unique Ligands	ARB, NA

Explore in 3D

1MN0 \| pdb_00001mn0	Download File View File

Crystal structure of galactose mutarotase from lactococcus lactis complexed with D-xylose

Thoden, J.B., Kim, J., Raushel, F.M., Holden, H.M.

(2002) J Biological Chem 277: 45458-45465

Released	2002-09-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus lactis
Macromolecule	Aldose 1-epimerase (protein)
Unique Ligands	NI, XYS

Explore in 3D

1MV5 \| pdb_00001mv5	Download File View File

Crystal structure of LmrA ATP-binding domain

Yuan, Y., Chen, H., Patel, D.

To be published

Released	2003-12-02
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Lactococcus lactis
Macromolecule	Multidrug resistance ABC transporter ATP-binding and permease protein (protein)
Unique Ligands	ADP, ATP, MG

Explore in 3D

1NNJ \| pdb_00001nnj	Download File View File

Crystal structure Complex between the Lactococcus lactis Fpg and an abasic site containing DNA

Serre, L., Pereira de Jesus, K., Boiteux, S., Zelwer, C., Castaing, B.

(2005) Nucleic Acids Res 33: 5936-5944

Released	2003-02-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Lactococcus lactis
Macromolecule	Formamidopyrimidine-DNA glycosylase (protein) 5'-D(CPTPCPTPTPTP(PDI)PTPTPTPCPTPCPG)-3' (nucleic acid) 5'-D(GPCPGPAPGPAPAPAPCPAPAPAPGPA)-3' (nucleic acid)
Unique Ligands	GOL, ZN