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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Klebsiella pneumoniae"

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Search Summary

This query matches 951 Structures.

Refinements

Structure Determination Methodology

experimental (951)

Scientific Name of Source Organism

	Klebsiella pneumoniae (751)
	Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (79)
	Klebsiella pneumoniae subsp. pneumoniae HS11286 (30)
	Escherichia coli K-12 (18)
	Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (18)
	Klebsiella pneumoniae 342 (14)
	Klebsiella pneumoniae subsp. pneumoniae (14)
	Klebsiella pneumoniae IS53 (13)
	synthetic construct (13)
	Homo sapiens (7)

More...

Taxonomy

	Bacteria (951)
	other sequences (13)
	Eukaryota (11)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (883)
	ELECTRON MICROSCOPY (44)
	SOLUTION NMR (23)
	ELECTRON CRYSTALLOGRAPHY (1)

Polymer Entity Type

	Protein (951)
	DNA (31)
	RNA (8)

Refinement Resolution (Å)

	0.5 - 1.0 (24)
	1.0 - 1.5 (197)
	1.5 - 2.0 (343)
	2.0 - 2.5 (205)
	2.5 - 3.0 (96)
	3.0 - 3.5 (33)
	3.5 - 4.0 (16)
	4.0 - 4.5 (7)
	> 4.5 (7)

Release Date

	1995 - 1999 (5)
	2000 - 2004 (26)
	2005 - 2009 (69)
	2010 - 2014 (149)
	2015 - 2019 (312)
	2020 - 2024 (368)
	2025 - 2029 (22)

Enzyme Classification Name

	Hydrolases (519)
	Transferases (69)
	Oxidoreductases (60)
	Lyases (25)
	Isomerases (16)
	Ligases (10)
	Translocases (3)

Membrane Protein Annotation

	PDBTM (49)
	MemProtMD (35)
	OPM (31)
	mpstruc (17)

Symmetry Type

	Asymmetric (594)
	Cyclic (351)
	Dihedral (49)
	Icosahedral (3)
	Helical (2)
	Tetrahedral (1)

SCOP Classification

	Multi-domain proteins (alpha and beta) (185)
	Alpha and beta proteins (a+b) (155)
	Alpha and beta proteins (a/b) (91)
	Artifacts (101)
	Membrane and cell surface proteins and peptides (23)
	All beta proteins (24)
	All alpha proteins (17)

AllSelected

1 to 25 of 951 Structures

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1ECS \| pdb_00001ecs	Download File View File

THE 1.7 A CRYSTAL STRUCTURE OF A BLEOMYCIN RESISTANCE DETERMINANT ENCODED ON THE TRANSPOSON TN5

Maruyama, M., Matoba, Y., Kumagai, T., Sugiyama, M.

(2001) J Biological Chem 276: 9992-9999

Released	2001-05-02
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Klebsiella pneumoniae
Macromolecule	BLEOMYCIN RESISTANCE PROTEIN (protein)
Unique Ligands	CA, PG4

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1EWJ \| pdb_00001ewj	Download File View File

CRYSTAL STRUCTURE OF BLEOMYCIN-BINDING PROTEIN COMPLEXED WITH BLEOMYCIN

Maruyama, M., Kumagai, T., Matoba, Y., Hata, Y., Sugiyama, M.

(2001) J Biological Chem 276: 9992-9999

Released	2001-04-26
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Klebsiella pneumoniae
Macromolecule	BLEOMYCIN RESISTANCE DETERMINANT (protein)
Unique Ligands	BLM

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1GEG \| pdb_00001geg	Download File View File

CRYATAL STRUCTURE ANALYSIS OF MESO-2,3-BUTANEDIOL DEHYDROGENASE

Otagiri, M., Kurisu, G., Ui, S., Kusunoki, M.

(2001) J Biochem 129: 205-208

Released	2001-02-28
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Klebsiella pneumoniae
Macromolecule	ACETOIN REDUCTASE (protein)
Unique Ligands	BME, GLC, MG, NAD

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1H1L \| pdb_00001h1l	Download File View File

NITROGENASE MO-FE PROTEIN FROM KLEBSIELLA PNEUMONIAE, NIFV MUTANT

Mayer, S.M., Gormal, C.A., Smith, B.E., Lawson, D.M.

(2002) J Biological Chem 277: 35263

Released	2002-07-29
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Klebsiella pneumoniae
Macromolecule	NITROGENASE MOLYBDENUM IRON PROTEIN ALPHA CHAIN (protein) NITROGENASE MOLYBDENUM IRON PROTEIN BETA CHAIN (protein)
Unique Ligands	CFM, CIT, CL, CLF, MG

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1HTZ \| pdb_00001htz	Download File View File

CRYSTAL STRUCTURE OF TEM52 BETA-LACTAMASE

Stevens, R.C., Orencia, M.C.

(2001) Nat Struct Biol 8: 238-242

Released	2001-03-21
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Klebsiella pneumoniae
Macromolecule	BETA-LACTAMASE MUTANT TEM52 (protein)

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1IWP \| pdb_00001iwp	Download File View File

Glycerol Dehydratase-cyanocobalamin Complex of Klebsiella pneumoniae

Yamanishi, M., Yunoki, M., Tobimatsu, T., Toraya, T.

(2002) Eur J Biochem 269: 4484-4494

Released	2002-10-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Glycerol Dehydratase Alpha subunit (protein) Glycerol Dehydratase Beta subunit (protein) Glycerol Dehydratase Gamma subunit (protein)
Unique Ligands	B12, K, PGO

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1MH6 \| pdb_00001mh6	Download File View File

Solution Structure of the Transposon Tn5-encoding Bleomycin-binding Protein, BLMT

Kumagai, T., Ohtani, K., Tsuboi, Y., Koike, T., Sugiyama, M.

To be published

Released	2003-02-19
Method	SOLUTION NMR
Organisms	Klebsiella pneumoniae
Macromolecule	BLEOMYCIN RESISTANCE PROTEIN (protein)

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1MMF \| pdb_00001mmf	Download File View File

Crystal structure of substrate free form of glycerol dehydratase

Liao, D.I., Dotson, G., Turner, I., Reiss, L., Emptage, M.

(2003) J Inorg Biochem 93: 84-91

Released	2003-06-10
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Klebsiella pneumoniae
Macromolecule	glycerol dehydrase alpha subunit (protein) glycerol dehydrase beta subunit (protein) glycerol dehydrase gamma subunit (protein)
Unique Ligands	B12, K

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1N9B \| pdb_00001n9b	Download File View File

Ultrahigh resolution structure of a class A beta-lactamase: On the mechanism and specificity of the extended-spectrum SHV-2 enzyme

Nukaga, M., Mayama, K., Hujer, A.M., Bonomo, R.A., Knox, J.R.

(2003) J Mol Biology 328: 289-301

Released	2003-04-08
Method	X-RAY DIFFRACTION 0.9 Å
Organisms	Klebsiella pneumoniae
Macromolecule	BETA-LACTAMASE SHV-2 (protein)
Unique Ligands	EPE, MA4, MPD

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1NBW \| pdb_00001nbw	Download File View File

Glycerol dehydratase reactivase

Liao, D.-I., Reiss, L., Turner Jr., I., Dotson, G.

(2003) Structure 11: 109-119

Released	2003-01-14
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Klebsiella pneumoniae
Macromolecule	GLYCEROL DEHYDRATASE REACTIVASE ALPHA SUBUNIT (protein) GLYCEROL DEHYDRATASE REACTIVASE BETA SUBUNIT (protein)
Unique Ligands	CA

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1ND4 \| pdb_00001nd4	Download File View File

Crystal structure of aminoglycoside-3'-phosphotransferase-IIa

Nurizzo, D., Shewry, S.C., Baker, E.N., Smith, C.A.

(2003) J Mol Biology 327: 491-506

Released	2003-09-16
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Aminoglycoside 3'-phosphotransferase (protein)
Unique Ligands	ACT, KAN, MG, NA

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1NIQ \| pdb_00001niq	Download File View File

Solution Structure of the HOO-Bm bound BLMT, Transposon Tn5-encoding Bleomycin-binding Protein

Sugiyama, M.

To be published

Released	2003-12-25
Method	SOLUTION NMR
Organisms	Klebsiella pneumoniae
Macromolecule	Bleomycin Resistance Protein (protein)
Unique Ligands	BLM, CU

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1NRZ \| pdb_00001nrz	Download File View File

Crystal structure of the IIBSor domain of the sorbose permease from Klebsiella pneumoniae solved to 1.75A resolution

Orriss, G.L., Erni, B., Schirmer, T.

(2003) J Mol Biology 327: 1111-1119

Released	2003-04-22
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Klebsiella pneumoniae
Macromolecule	PTS system, sorbose-specific IIB component (protein)
Unique Ligands	SO4

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1ONG \| pdb_00001ong	Download File View File

SHV-1 beta-lactamase with a penem inhibitor

Nukaga, M., Mayama, K., Bonomo, R.A., Knox, J.R.

(2003) Biochemistry 42: 13152-13159

Released	2003-12-09
Method	X-RAY DIFFRACTION 1.1 Å
Organisms	Klebsiella pneumoniae
Macromolecule	BETA-LACTAMASE SHV-1 (protein)
Unique Ligands	MA4, WY4

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1OSM \| pdb_00001osm	Download File View File

OSMOPORIN (OMPK36) FROM KLEBSIELLA PNEUMONIAE

Dutzler, R., Schirmer, T.

(1999) Structure 7: 425-434

Released	1999-07-26
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	OMPK36 (protein)
Unique Ligands	D12

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1OTV \| pdb_00001otv	Download File View File

PqqC, Pyrroloquinolinquinone Synthase C

Magnusson, O.T., Toyama, H., Saeki, M., Rojas, A., Reed, J.C., Adachi, O., Klinman, J.P., SChwarzenbacher, R.

(2004) Proc Natl Acad Sci U S A 101: 7913-7918

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Coenzyme PQQ synthesis protein C (protein)

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1OTW \| pdb_00001otw	Download File View File

Crystal structure of PqqC in complex with PQQ and a putative H2O2

Magnusson, O.T., Toyama, H., Saeki, M., Rojas, A., Reed, J.C., Liddington, R.C., Klinman, J.P., Schwarzenbacher, R.

(2004) Proc Natl Acad Sci U S A 101: 7913-7918

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Coenzyme PQQ synthesis protein C (protein)
Unique Ligands	PEO, PQQ

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1OZF \| pdb_00001ozf	Download File View File

The crystal structure of Klebsiella pneumoniae acetolactate synthase with enzyme-bound cofactors

Pang, S.S., Duggleby, R.G., Schowen, R.L., Guddat, L.W.

(2004) J Biological Chem 279: 2242-2253

Released	2003-11-11
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Acetolactate synthase, catabolic (protein)
Unique Ligands	MG, PEG, PO4, TPP

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1OZG \| pdb_00001ozg	Download File View File

The crystal structure of Klebsiella pneumoniae acetolactate synthase with enzyme-bound cofactor and with an unusual intermediate

Pang, S.S., Duggleby, R.G., Schowen, R.L., Guddat, L.W.

(2004) J Biological Chem 279: 2242-2253

Released	2003-11-04
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Acetolactate synthase, catabolic (protein)
Unique Ligands	HE3, MG, PEG, PO4

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1OZH \| pdb_00001ozh	Download File View File

The crystal structure of Klebsiella pneumoniae acetolactate synthase with enzyme-bound cofactor and with an unusual intermediate.

Pang, S.S., Duggleby, R.G., Schowen, R.L., Guddat, L.W.

(2004) J Biological Chem 279: 2242-2253

Released	2003-11-04
Method	X-RAY DIFFRACTION 2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Acetolactate synthase, catabolic (protein)
Unique Ligands	HE3, MG, PEG, PGE, PO4

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1P0Z \| pdb_00001p0z	Download File View File

Sensor Kinase CitA binding domain

Reinelt, S., Hofmann, E., Gerharz, T., Bott, M., Madden, D.R.

(2003) J Biological Chem 278: 39189-39196

Released	2003-08-19
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Klebsiella pneumoniae
Macromolecule	Sensor kinase citA (protein)
Unique Ligands	FLC, MO7, NA, OMO

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1Q2P \| pdb_00001q2p	Download File View File

SHV-1 class A beta-lactamase complexed with penem WAY185229

Nukaga, M., Venkatesan, A.M., Mansour, T.S., Hujer, A., Bonomo, R.A., Knox, J.R.

(2004) J Med Chem 47: 6556-6568

Released	2004-09-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Klebsiella pneumoniae
Macromolecule	beta-lactamase SHV-1 (protein)
Unique Ligands	MA4, WY2

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1QGU \| pdb_00001qgu	Download File View File

NITROGENASE MO-FE PROTEIN FROM KLEBSIELLA PNEUMONIAE, DITHIONITE-REDUCED STATE

Mayer, S.M., Lawson, D.M., Gormal, C.A., Roe, S.M., Smith, B.E.

(1999) J Mol Biology 292: 871-891

Released	1999-11-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Klebsiella pneumoniae
Macromolecule	PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) (protein)
Unique Ligands	CFM, CL, CLF, EDO, HCA, MG

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1QH1 \| pdb_00001qh1	Download File View File

NITROGENASE MOFE PROTEIN FROM KLEBSIELLA PNEUMONIAE, PHENOSAFRANIN OXIDIZED STATE

Mayer, S.M., Lawson, D.M., Gormal, C.A., Roe, S.M., Smith, B.E.

(1999) J Mol Biology 292: 871-891

Released	1999-11-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Klebsiella pneumoniae
Macromolecule	PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) (protein)
Unique Ligands	CFM, CL, CLF, EDO, HCA, MG

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1QH8 \| pdb_00001qh8	Download File View File

NITROGENASE MOFE PROTEIN FROM KLEBSIELLA PNEUMONIAE, AS-CRYSTALLIZED (MIXED OXIDATION) STATE

Mayer, S.M., Lawson, D.M., Gormal, C.A., Roe, S.M., Smith, B.E.

(1999) J Mol Biology 292: 871-891

Released	1999-11-01
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Klebsiella pneumoniae
Macromolecule	PROTEIN (NITROGENASE MOLYBDENUM IRON PROTEIN) (protein)
Unique Ligands	CFM, CL, CLF, EDO, HCA, MG

1 to 25 of 951 Structures

Page 1 of 39

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1ECS | pdb_00001ecs

1EWJ | pdb_00001ewj

1GEG | pdb_00001geg

1H1L | pdb_00001h1l

1HTZ | pdb_00001htz

1IWP | pdb_00001iwp

1MH6 | pdb_00001mh6

1MMF | pdb_00001mmf

1N9B | pdb_00001n9b

1NBW | pdb_00001nbw

1ND4 | pdb_00001nd4

1NIQ | pdb_00001niq

1NRZ | pdb_00001nrz

1ONG | pdb_00001ong

1OSM | pdb_00001osm

1OTV | pdb_00001otv

1OTW | pdb_00001otw

1OZF | pdb_00001ozf

1OZG | pdb_00001ozg

1OZH | pdb_00001ozh

1P0Z | pdb_00001p0z

1Q2P | pdb_00001q2p

1QGU | pdb_00001qgu

1QH1 | pdb_00001qh1

1QH8 | pdb_00001qh8