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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Canine parvovirus"

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Search Summary

This query matches 21 Structures.

Refinements

Structure Determination Methodology

experimental (21)

Scientific Name of Source Organism

	Canine parvovirus (12)
	Canis lupus familiaris (7)
	Canine parvovirus 2a (4)
	Canine parvovirus 2b (2)
	Canine parvovirus strain B (2)
	Mus musculus (2)
	Canine parvovirus 2 (1)
	Rattus norvegicus (1)

Taxonomy

	Monodnaviria (21)
	Eukaryota (10)

Experimental Method

	ELECTRON MICROSCOPY (14)
	X-RAY DIFFRACTION (7)

Polymer Entity Type

	Protein (21)
	DNA (3)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (3)
	2.5 - 3.0 (2)
	3.0 - 3.5 (9)
	3.5 - 4.0 (4)
	4.0 - 4.5 (2)

Release Date

	1990 - 1994 (1)
	1995 - 1999 (2)
	2000 - 2004 (4)
	2015 - 2019 (2)
	2020 - 2024 (6)
	2025 - 2029 (6)

Symmetry Type

	Icosahedral (14)
	Asymmetric (7)

SCOP Classification

All beta proteins (9)

AllSelected

1 to 21 of 21 Structures

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1C8D \| pdb_00001c8d	Download File View File

CANINE PANLEUKOPENIA VIRUS EMPTY CAPSID STRUCTURE

Rossmann, M.G., Simpson, A.A.

(2000) J Mol Biology 300: 597-610

Released	2000-08-09
Method	X-RAY DIFFRACTION 3 Å
Organisms	Canine parvovirus
Macromolecule	CANINE PARVOVIRUS CAPSID (protein)
Unique Ligands	CA

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1C8H \| pdb_00001c8h	Download File View File

CANINE PARVOVIRUS STRAIN D EMPTY CAPSID STRUCTURE AT PH 5.5

Rossmann, M.G., Simpson, A.A.

(2000) J Mol Biology 300: 597-610

Released	2000-08-09
Method	X-RAY DIFFRACTION 3.5 Å
Organisms	Canine parvovirus
Macromolecule	CANINE PARVOVIRUS CAPSID (protein)
Unique Ligands	CA

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1IJS \| pdb_00001ijs	Download File View File

CPV (STRAIN D) mutant A300D, complex (VIRAL COAT/DNA), VP2, PH=7.5, T=4 DEGREES C

Llamas-Saiz, A.L., Agbandje-McKenna, M., Parker, J.S.L., Wahid, A.T.M., Parrish, C.R., Rossmann, M.G.

(1996) Virology 225: 65-71

Released	1996-12-23
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Canine parvovirus
Macromolecule	PROTEIN (PARVOVIRUS COAT PROTEIN) (protein) DNA (5'-D(APC)-3') (nucleic acid) DNA (5'-D(CPCPAPCPCPCPCPAP*A)-3') (nucleic acid)

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1P5W \| pdb_00001p5w	Download File View File

The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants

Agbandje-McKenna, M., Govindasamy, L.

(2003) J Virol 77: 12211-12221

Released	2003-08-26
Method	X-RAY DIFFRACTION 3.3 Å
Organisms	Canine parvovirus
Macromolecule	Coat protein VP2 (protein) 5'-D(P(3DR)PTPAPCPCPTPCPTPTPGP*C)-3' (nucleic acid)
Unique Ligands	MG

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1P5Y \| pdb_00001p5y	Download File View File

The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants

Agbandje-McKenna, M., Govindasamy, L.

(2003) J Virol 77: 12211-12221

Released	2003-08-26
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Canine parvovirus
Macromolecule	Coat protein VP2 (protein)

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2CAS \| pdb_00002cas	Download File View File

THE CANINE PARVOVIRUS EMPTY CAPSID STRUCTURE

Wu, H., Rossmann, M.G.

(1993) J Mol Biology 233: 231-244

Released	1994-01-31
Method	X-RAY DIFFRACTION 3 Å
Organisms	Canine parvovirus
Macromolecule	CANINE PARVOVIRUS EMPTY CAPSID (STRAIN D) VIRAL PROTEIN 2 (protein)

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3JCX \| pdb_00003jcx	Download File View File

Canine Parvovirus complexed with Fab E

Organtini, L.J., Iketani, S., Huang, K., Ashley, R.E., Makhov, A.M., Conway, J.F., Parrish, C.R., Hafenstein, S.

(2016) J Virol 90: 9733-9742

Released	2016-07-20
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Canine parvovirus Rattus norvegicus
Macromolecule	Capsid protein 2 (protein) Fab E heavy chain (protein) Fab E light chain (protein)

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4DPV \| pdb_00004dpv	Download File View File

PARVOVIRUS/DNA COMPLEX

Chapman, M.S., Rossmann, M.G.

(1996) J Mol Biology 264: 497-520

Released	1997-04-01
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Canine parvovirus
Macromolecule	PROTEIN (PARVOVIRUS COAT PROTEIN) (protein) DNA (5'-D(APTPAPCPCPTPCPTPTPGP*C)-3') (nucleic acid)
Unique Ligands	MG

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6OAS \| pdb_00006oas	Download File View File

Structure of canine parvovirus in complex with transferrin receptor type-1

Lee, H., Hafenstein, S.

(2019) Proc Natl Acad Sci U S A 116: 20462-20471

Released	2019-09-18
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Canine parvovirus 2
Macromolecule	Capsid protein VP1 (protein)

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7M3L \| pdb_00007m3l	Download File View File

Canine parvovirus and Fab14 at partial occupancy

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Canine parvovirus Mus musculus
Macromolecule	Capsid protein 2 (protein) Fab14 Heavy Chain (protein) Fab14 Light Chain (protein)

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7M3M \| pdb_00007m3m	Download File View File

Canine parvovirus and Fab14 at partial occupancy

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 2.26 Å
Organisms	Canine parvovirus
Macromolecule	Capsid protein 2 (protein)

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7M3N \| pdb_00007m3n	Download File View File

Canine parvovirus and Fab14 asymmetric reconstruction

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Canine parvovirus Mus musculus
Macromolecule	CPV Fab14 heavy chain (protein) CPV Fab14 light chain (protein) Capsid protein 2 (protein)

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7M3O \| pdb_00007m3o	Download File View File

Canine parvovirus asymmetric map

Goteschius, D.J., Hartmann, S.R., Hafenstein, S.L.

(2021) Proc Natl Acad Sci U S A 118:

Released	2021-07-28
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Canine parvovirus
Macromolecule	Capsid protein 2 (protein)

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7UTR \| pdb_00007utr	Download File View File

CPV Affinity Purified Polyclonal Fab B Site Fab

Hartmann, S.R., Hafenstein, S.L., Charnesky, A.J.

(2023) Commun Biol 6: 955-955

Released	2023-10-04
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Canine parvovirus strain B Canis lupus familiaris
Macromolecule	Capsid protein VP1 (protein) Heavy chain antibody fragment (protein) Light chain antibody fragment (protein)

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7UTV \| pdb_00007utv	Download File View File

CPV Total-Fab Polyclonal B Site Fab (2 of 2)

Hartmann, S.R., Hafenstein, S.L., Charnesky, A.J.

(2023) Commun Biol 6: 955-955

Released	2023-10-04
Method	ELECTRON MICROSCOPY 3 Å
Organisms	Canine parvovirus strain B Canis lupus familiaris
Macromolecule	Capsid protein VP1 (protein) Heavy chain antibody fragment (protein) Light chain antibody fragment (protein)

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9E60 \| pdb_00009e60	Download File View File

Canine parvovirus subtype 2a empty capsid in complex with Fab fragments of Mab 7C8

Lee, H., Hafenstein, S.

(2025) Proc Natl Acad Sci U S A 122: e2423460122-e2423460122

Released	2025-01-29
Method	ELECTRON MICROSCOPY 2.65 Å
Organisms	Canine parvovirus 2a Canis lupus familiaris
Macromolecule	Capsid protein 2 (protein) Heavy chain antibody fragment (protein) Light chain antibody fragment (protein)

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9E7W \| pdb_00009e7w	Download File View File

Canine parvovirus subtype 2a empty capsid in complex with Fab fragments of Mab 3G6

Lee, H., Hafenstein, S.

(2025) Proc Natl Acad Sci U S A 122: e2423460122-e2423460122

Released	2025-01-29
Method	ELECTRON MICROSCOPY 3.7 Å
Organisms	Canine parvovirus 2a Canis lupus familiaris
Macromolecule	Capsid protein 2 (protein) Heavy chain antibody fragment (protein) Light chain antibody fragment (protein)

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9E7X \| pdb_00009e7x	Download File View File

Canine parvovirus subtype 2a empty capsid in complex with Fab fragments of Mab 2C5

Lee, H., Hafenstein, S.

(2025) Proc Natl Acad Sci U S A 122: e2423460122-e2423460122

Released	2025-01-29
Method	ELECTRON MICROSCOPY 3.2 Å
Organisms	Canine parvovirus 2a Canis lupus familiaris
Macromolecule	Capsid protein 2 (protein) Heavy chain antibody fragment (protein) Light chain antibody fragment (protein)

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9E80 \| pdb_00009e80	Download File View File

Canine parvovirus subtype 2a empty capsid in complex with Fab fragments of Mab 2C5

Lee, H., Hafenstein, S.

(2025) Proc Natl Acad Sci U S A 122: e2423460122-e2423460122

Released	2025-01-29
Method	ELECTRON MICROSCOPY 1.81 Å
Organisms	Canine parvovirus 2a
Macromolecule	Capsid protein 2 (protein)

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9E89 \| pdb_00009e89	Download File View File

CPV2a capsid complexed with scFv2

Lee, H., Hafenstein, S.

(2025) Proc Natl Acad Sci U S A 122: e2423460122-e2423460122

Released	2025-01-29
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Canine parvovirus 2b Canis lupus familiaris
Macromolecule	Capsid protein (protein) Heavy-chain of scFv clone 2 (protein) Light-chain of scFv clone 2 (protein)

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9E8D \| pdb_00009e8d	Download File View File

CPV2a capsid complexed with scFv1

Lee, H., Hafenstein, S.

(2025) Proc Natl Acad Sci U S A 122: e2423460122-e2423460122

Released	2025-01-29
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Canine parvovirus 2b Canis lupus familiaris
Macromolecule	Capsid protein (protein) Heavy-chain of scFv clone 1 (protein) Light-chain of scFv clone 1 (protein)

1 to 21 of 21 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification

1C8D | pdb_00001c8d

1C8H | pdb_00001c8h

1IJS | pdb_00001ijs

1P5W | pdb_00001p5w

1P5Y | pdb_00001p5y

2CAS | pdb_00002cas

3JCX | pdb_00003jcx

4DPV | pdb_00004dpv

6OAS | pdb_00006oas

7M3L | pdb_00007m3l

7M3M | pdb_00007m3m

7M3N | pdb_00007m3n

7M3O | pdb_00007m3o

7UTR | pdb_00007utr

7UTV | pdb_00007utv

9E60 | pdb_00009e60

9E7W | pdb_00009e7w

9E7X | pdb_00009e7x

9E80 | pdb_00009e80

9E89 | pdb_00009e89

9E8D | pdb_00009e8d