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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy ID (Full Lineage) = "108098"

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Search Summary

This query matches 28 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (28)

Scientific Name of Source Organism

	Human adenovirus B3 (12)
	Human adenovirus 11 (4)
	Human adenovirus 7 (3)
	Human adenovirus 21 (2)
	Human adenovirus 35 (2)
	Human adenovirus 11p (1)
	Human adenovirus 14 (1)
	Human adenovirus 14p1 (1)
	Human adenovirus 16 (1)
	Human mastadenovirus B (1)

Taxonomy

Varidnaviria (28)

Experimental Method

	X-RAY DIFFRACTION (19)
	ELECTRON MICROSCOPY (9)

Polymer Entity Type

Protein (28)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (3)
	2.0 - 2.5 (4)
	2.5 - 3.0 (5)
	3.0 - 3.5 (5)
	3.5 - 4.0 (7)
	> 4.5 (2)

Release Date

	2000 - 2004 (1)
	2005 - 2009 (7)
	2010 - 2014 (7)
	2015 - 2019 (7)
	2020 - 2024 (6)

Symmetry Type

	Cyclic (17)
	Asymmetric (6)
	Icosahedral (5)

SCOP Classification

All beta proteins (14)

AllSelected

1 to 25 of 28 Polymer Entities

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1H7Z: Entity 1	Download File View File

Adenovirus Ad3 fibre head

Durmort, C., Stehlin, C., Schoehn, G., Mitraki, A., Drouet, E., Cusack, S., Burmeister, W.P.

(2001) Virology 285: 302

Released	2001-07-19
Method	X-RAY DIFFRACTION 1.6 Å
Chain IDs	A, B, C
Organism	Human adenovirus B3
Macromolecule	ADENOVIRUS FIBRE PROTEIN

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2O39: Entity 1	Download File View File

Human Adenovirus type 11 knob in complex with domains SCR1 and SCR2 of CD46 (membrane cofactor protein, MCP)

Persson, D.B., Reiter, D.M., Arnberg, N., Stehle, T.

(2007) Nat Struct Mol Biol 14: 164-166

Released	2007-01-09
Method	X-RAY DIFFRACTION 2.85 Å
Chain IDs	A, B
Organism	Human adenovirus 11p
Macromolecule	Fiber protein

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2QLK: Entity 1	Download File View File

Adenovirus AD35 fibre head

Liaw, Y.-C., Amiraslanov, I., Wang, H., Lieber, A.

(2007) J Virol 81: 12785-12792

Released	2008-02-19
Method	X-RAY DIFFRACTION 2.02 Å
Chain ID	A
Organism	Human adenovirus 35
Macromolecule	Fiber

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3BQ4: Entity 1	Download File View File

Crystal Structure of Ad35 fiber knob

Pache, L., Venkataraman, S., Nemerow, G.R., Reddy, V.S.

(2008) Virology 375: 573-579

Released	2008-06-03
Method	X-RAY DIFFRACTION 2.7 Å
Chain IDs	A, B, C [auth D], D [auth E], E [auth F]
Organism	Human adenovirus 35
Macromolecule	Fiber

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3CNC: Entity 1	Download File View File

Crystal Structure of Ad16 fiber knob

Pache, L., Venkataraman, S., Nemerow, G.R., Reddy, V.S.

(2008) J Virol 82: 7923-7931

Released	2008-06-17
Method	X-RAY DIFFRACTION 2.4 Å
Chain IDs	A, B, C, D, E
Organism	Human adenovirus 16
Macromolecule	Fiber protein

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3EXV: Entity 1	Download File View File

Crystal structure of the human Adenovirus type 11 fiber knob

Persson, B.D., Reiter, D.M., Arnberg, N., Stehle, T.

(2009) J Virol 83: 673-686

Released	2008-11-25
Method	X-RAY DIFFRACTION 1.45 Å
Chain ID	A
Organism	Human mastadenovirus B
Macromolecule	Fiber protein

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3EXW: Entity 1	Download File View File

Crystal structure of the human Adenovirus type 7 fiber knob

Persson, B.D., Reiter, D.M., Arnberg, N., Stehle, T.

(2009) J Virol 83: 673-686

Released	2008-11-25
Method	X-RAY DIFFRACTION 1.75 Å
Chain IDs	A, B, C
Organism	Human adenovirus 7
Macromolecule	L5 fiber protein

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3F0Y: Entity 1	Download File View File

Crystal structure of the human Adenovirus type 14 fiber knob

Persson, B.D., Reiter, D.M., Arnberg, N., Stehle, T.

(2009) J Virol 83: 673-686

Released	2008-11-25
Method	X-RAY DIFFRACTION 1.8 Å
Chain IDs	A, B, C, D, E More (9)
Organism	Human adenovirus 14
Macromolecule	Fiber protein

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3L88: Entity 1	Download File View File

Crystal structure of the human Adenovirus type 21 fiber knob

Cupelli, K., Jost, M., Persson, B.D., Stehle, T.

(2010) J Virol 84: 3189-3200

Released	2010-04-14
Method	X-RAY DIFFRACTION 2.5 Å
Chain IDs	A, B, C, D, E More (12)
Organism	Human adenovirus 21
Macromolecule	Fiber protein

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3L89: Entity 1	Download File View File

Human Adenovirus type 21 knob in complex with domains SCR1 and SCR2 of CD46 (membrane cofactor protein, MCP)

Cupelli, K., Stehle, T.

(2010) J Virol 84: 3189-3200

Released	2010-04-14
Method	X-RAY DIFFRACTION 3.5 Å
Chain IDs	A, B, C, D, E More (12)
Organism	Human adenovirus 21
Macromolecule	Fiber protein

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3O8E: Entity 1	Download File View File

Structure of extracelllar portion of CD46 in complex with Adenovirus type 11 knob

Persson, B.D., Schmitz, N.B., Casasnovas, J.M., Stehle, T.

(2010) PLoS Pathog 6: e1001122-e1001122

Released	2010-10-13
Method	X-RAY DIFFRACTION 2.84 Å
Chain IDs	A, C
Organism	Human adenovirus 11
Macromolecule	Fiber 36.1 kDa protein

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4AQQ: Entity 1	Download File View File

Dodecahedron formed of penton base protein from adenovirus Ad3

Burmeister, W.P., Szolajska, E., Zochowska, M., Nerlo, B., Andreev, I., Schoehn, G., Andrieu, J.-P., Fender, P., Naskalska, A., Zubieta, C., Cusack, S., Chroboczek, J.

(2012) PLoS One 7: 46075

Released	2012-10-24
Method	X-RAY DIFFRACTION 4.75 Å
Chain ID	A
Organism	Human adenovirus B3
Macromolecule	L2 PROTEIN III (PENTON BASE)

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4AR2: Entity 1	Download File View File

Dodecahedron formed of penton base protein from adenovirus Ad3

Burmeister, W.P., Szolajska, E., Zochowska, M., Nerlo, B., Andreev, I., Schoehn, G., Andrieu, J.-P., Fender, P., Naskalska, A., Zubieta, C., Cusack, S., Chroboczek, J.

(2012) PLoS One 7: 46075

Released	2012-10-24
Method	X-RAY DIFFRACTION 3.8 Å
Chain ID	A
Organism	Human adenovirus B3
Macromolecule	L2 PROTEIN III (PENTON BASE)

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4AR2: Entity 2	Download File View File

Dodecahedron formed of penton base protein from adenovirus Ad3

Burmeister, W.P., Szolajska, E., Zochowska, M., Nerlo, B., Andreev, I., Schoehn, G., Andrieu, J.-P., Fender, P., Naskalska, A., Zubieta, C., Cusack, S., Chroboczek, J.

(2012) PLoS One 7: 46075

Released	2012-10-24
Method	X-RAY DIFFRACTION 3.8 Å
Chain ID	B [auth P]
Organism	Human adenovirus B3
Macromolecule	FIBER PROTEIN

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4LIY: Entity 1	Download File View File

Structure of the adenovirus 3 knob domain K217E and F224S mutant

Zubieta, C., Fender, P.

(2013) J Virol 87: 11346-11362

Released	2014-05-28
Method	X-RAY DIFFRACTION 2.1 Å
Chain IDs	A, B, C
Organism	Human adenovirus B3
Macromolecule	Fiber protein

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4WYJ: Entity 1	Download File View File

Adenovirus 3 head domain mutant V239D

Lieber, A., Zubieta, C., Fender, P.

(2015) Mol Ther Methods Clin Dev 2: 15005-15005

Released	2015-07-01
Method	X-RAY DIFFRACTION 2.65 Å
Chain IDs	A, B, C
Organism	Human adenovirus B3
Macromolecule	Fiber protein

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4ZDG: Entity 1	Download File View File

Structure of the Adenovirus 14p1 knob domain

Fender, P., Ducournau, C., Zubieta, C.

(2015) J Virol 89: 10841-10859

Released	2015-09-09
Method	X-RAY DIFFRACTION 3.2 Å
Chain IDs	C, A, B
Organism	Human adenovirus 14p1
Macromolecule	Fiber protein

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6F6O: Entity 1	Download File View File

Structure of Adenovirus 3 fiber head V239D mutant

Zubieta, C., Fender, P., Stermann, E., Lieber, A.

(2015) Mol Ther Methods Clin Dev 2: 15005-15005

Released	2018-12-19
Method	X-RAY DIFFRACTION 1.49 Å
Chain ID	A
Organism	Human adenovirus B3
Macromolecule	Fiber protein

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6HCR: Entity 1	Download File View File

Synthetic Self-assembling ADDomer Platform for Highly Efficient Vaccination by Genetically-encoded Multi-epitope Display

Bufton, J.C., Berger, I., Schaffitzel, C., Garzoni, F., Rabi, F.A.

(2019) Sci Adv 5: eaaw2853-eaaw2853

Released	2019-08-28
Method	ELECTRON MICROSCOPY 3.5 Å
Chain IDs	A [auth z], AA [auth a], AB [auth 2], B [auth A], BA [auth b] More (60)
Organism	Human adenovirus B3
Macromolecule	Penton protein

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6QNT: Entity 1	Download File View File

Human Adenovirus type 3 fiber knob in complex with one copy of Desmoglein-2

Effantin, G.

(2019) Nat Commun 10: 1181-1181

Released	2019-03-27
Method	ELECTRON MICROSCOPY 3.5 Å
Chain IDs	A, B, C
Organism	Human adenovirus B3
Macromolecule	Fiber protein

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6QNU: Entity 1	Download File View File

Human Adenovirus type 3 fiber knob in complex with two copies of Desmoglein-2

Effantin, G.

(2019) Nat Commun 10: 1181-1181

Released	2019-03-27
Method	ELECTRON MICROSCOPY 3.8 Å
Chain IDs	A, B, C
Organism	Human adenovirus B3
Macromolecule	Fiber protein

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6SIT: Entity 1	Download File View File

Pseudo-atomic crystal structure of the desmoglein 2 - human adenovirus serotype 3 fibre knob complex

Burmeister, W.P., Fender, P., Vassal-Stermann, E.

(2019) Acta Crystallogr F Struct Biol Commun 75: 750-757

Released	2019-12-18
Method	X-RAY DIFFRACTION 4.5 Å
Chain ID	A
Organism	Human adenovirus B3
Macromolecule	Fiber protein

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7AGF: Entity 1	Download File View File

HAd7 knob in complex with 3 EC2-EC3 modules of DSG-2

Effantin, G., Vassal-Stermann, E., Fender, P.

(2020) Viruses 12:

Released	2020-10-14
Method	ELECTRON MICROSCOPY 3.1 Å
Chain IDs	A, E [auth B], F [auth C]
Organism	Human adenovirus 7
Macromolecule	Fiber

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7AGG: Entity 1	Download File View File

HAd7 knob in complex with 2 EC2-EC3 modules of DSG-2

Effantin, G., Vassal-Stermann, E., Fender, P.

(2020) Viruses 12:

Released	2020-10-14
Method	ELECTRON MICROSCOPY 3.3 Å
Chain IDs	A, C [auth B], D [auth C]
Organism	Human adenovirus 7
Macromolecule	Fiber

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8C9N: Entity 1	Download File View File

MiniCoV-ADDomer, a SARS-CoV-2 epitope presenting viral like particle

Bufton, J.C., Capin, J., Boruku, U., Garzoni, F., Schaffitzel, C., Berger, I.

(2023) Antib Ther 6: 277-297

Released	2023-12-06
Method	ELECTRON MICROSCOPY 2.36 Å
Chain IDs	A [auth 1], AA, AB, B [auth A], BA More (60)
Organism	Human adenovirus B3
Macromolecule	Penton protein