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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Expression Organism = "Escherichia coli BL21"

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Search Summary

This query matches 8,935 Structures.

Refinements

Structure Determination Methodology

experimental (8,935)

Scientific Name of Source Organism

	Homo sapiens (2,629)
	Mus musculus (357)
	synthetic construct (333)
	Escherichia coli (313)
	Escherichia coli K-12 (180)
	Rattus norvegicus (158)
	Saccharomyces cerevisiae (153)
	Mycobacterium tuberculosis H37Rv (130)
	Bacillus subtilis (106)
	Bos taurus (103)

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Taxonomy

	Eukaryota (4,366)
	Bacteria (3,762)
	Riboviria (572)
	other sequences (334)
	Archaea (219)
	Duplodnaviria (167)
	Eukaryota (eukaryotes) (53)
	Varidnaviria (36)
	unclassified sequences (21)
	Monodnaviria (16)

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Experimental Method

	X-RAY DIFFRACTION (8,056)
	SOLUTION NMR (537)
	ELECTRON MICROSCOPY (325)
	SOLID-STATE NMR (11)
	NEUTRON DIFFRACTION (8)
	SOLUTION SCATTERING (6)
	EPR (2)
	THEORETICAL MODEL (1)

Polymer Entity Type

	Protein (8,933)
	DNA (300)
	RNA (167)
	NA-hybrid (12)

Refinement Resolution (Å)

	0.5 - 1.0 (37)
	1.0 - 1.5 (759)
	1.5 - 2.0 (2,951)
	2.0 - 2.5 (2,499)
	2.5 - 3.0 (1,355)
	3.0 - 3.5 (479)
	3.5 - 4.0 (166)
	4.0 - 4.5 (52)
	> 4.5 (90)

Release Date

	1995 - 1999 (167)
	2000 - 2004 (870)
	2005 - 2009 (1,798)
	2010 - 2014 (2,385)
	2015 - 2019 (2,032)
	2020 - 2024 (1,615)
	2025 - 2029 (68)

Enzyme Classification Name

	Hydrolases (1,941)
	Transferases (1,623)
	Oxidoreductases (708)
	Lyases (361)
	Isomerases (280)
	Ligases (218)
	Translocases (23)

Membrane Protein Annotation

	OPM (125)
	PDBTM (117)
	mpstruc (80)
	MemProtMD (87)

Symmetry Type

	Asymmetric (5,318)
	Cyclic (3,229)
	Dihedral (713)
	Helical (36)
	Tetrahedral (23)
	Icosahedral (16)
	Octahedral (11)

SCOP Classification

	Alpha and beta proteins (a/b) (1,830)
	All beta proteins (1,250)
	Alpha and beta proteins (a+b) (1,240)
	Artifacts (1,100)
	All alpha proteins (903)
	Multi-domain proteins (alpha and beta) (145)
	Small proteins (104)
	Membrane and cell surface proteins and peptides (48)
	Coiled coil proteins (39)
	Peptides (11)

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AllSelected

1 to 25 of 8,935 Structures

Page 1 of 358

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13PK \| pdb_000013pk	Download File View File

TERNARY COMPLEX OF PHOSPHOGLYCERATE KINASE FROM TRYPANOSOMA BRUCEI

Bernstein, B.E., Michels, P.A.M., Hol, W.G.J.

(1997) Nature 385: 275-278

Released	1997-12-24
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Trypanosoma brucei
Macromolecule	3-PHOSPHOGLYCERATE KINASE (protein)
Unique Ligands	3PG, ADP, MG, PO4

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16PK \| pdb_000016pk	Download File View File

PHOSPHOGLYCERATE KINASE FROM TRYPANOSOMA BRUCEI BISUBSTRATE ANALOG

Bernstein, B.E., Bressi, J., Blackburn, M., Gelb, M., Hol, W.G.J.

(1998) J Mol Biology 279: 1137-1148

Released	1998-11-25
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Trypanosoma brucei
Macromolecule	3-PHOSPHOGLYCERATE KINASE (protein)
Unique Ligands	BIS, EPE

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1A07 \| pdb_00001a07	Download File View File

C-SRC (SH2 DOMAIN) COMPLEXED WITH ACE-MALONYL TYR-GLU-(N,N-DIPENTYL AMINE)

Shewchuk, L., Jordan, S.

(1997) Biochemistry 36: 6283-6293

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	ACE-MALONYL TYR-GLU-(N,N-DIPENTYL AMINE) (protein) C-SRC TYROSINE KINASE (protein)

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1A08 \| pdb_00001a08	Download File View File

C-SRC (SH2 DOMAIN) COMPLEXED WITH ACE-DIFLUORO PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE)

Shewchuk, L., Jordan, S.

(1997) Biochemistry 36: 6283-6293

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	ACE-DIFLUORO PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE) (protein) C-SRC TYROSINE KINASE (protein)

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1A09 \| pdb_00001a09	Download File View File

C-src (SH2 domain) complexed with ace-formyl phosphotyr-glu-(n,n-dipentyl amine)

Shewchuk, L., Jordan, S.

(1997) Biochemistry 36: 6283-6293

Released	1998-04-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ACE-FORMYL PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE) (protein) C-SRC TYROSINE KINASE (protein)

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1A11 \| pdb_00001a11	Download File View File

NMR STRUCTURE OF MEMBRANE SPANNING SEGMENT 2 OF THE ACETYLCHOLINE RECEPTOR IN DPC MICELLES, 10 STRUCTURES

Gesell, J.J., Sun, W., Montal, M., Opella, S.J.

(1999) Nat Struct Biol 6: 374-379

Released	1998-04-08
Method	SOLUTION NMR
Organisms	Rattus norvegicus
Macromolecule	ACETYLCHOLINE RECEPTOR M2 (protein)

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1A1A \| pdb_00001a1a	Download File View File

C-SRC (SH2 DOMAIN WITH C188A MUTATION) COMPLEXED WITH ACE-FORMYL PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE)

Shewchuk, L., Jordan, S.

(1997) Biochemistry 36: 6283-6293

Released	1998-04-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ACE-FORMYL PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE) (protein) C-SRC TYROSINE KINASE (protein)

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1A1B \| pdb_00001a1b	Download File View File

C-SRC (SH2 DOMAIN) COMPLEXED WITH ACE-PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE)

Shewchuk, L., Jordan, S.

(1997) Biochemistry 36: 6283-6293

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	ACE-PHOSPHOTYR-GLU-(N,N-DIPENTYL AMINE) (protein) C-SRC TYROSINE KINASE (protein)

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1A1C \| pdb_00001a1c	Download File View File

C-SRC (SH2 DOMAIN) COMPLEXED WITH ACE-PHOSPHOTYR-GLU-(N-ME(-(CH2)3-CYCLOPENTYL))

Shewchuk, L., Jordan, S.

(1997) Biochemistry 36: 6283-6293

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	ACE-PHOSPHOTYR-GLU-(N-ME(-(CH2)3-CYCLOPENTYL)) (protein) C-SRC TYROSINE KINASE (protein)

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1A1D \| pdb_00001a1d	Download File View File

YEAST RNA POLYMERASE SUBUNIT RPB8, NMR, MINIMIZED AVERAGE STRUCTURE, ALPHA CARBONS ONLY

Krapp, S., Kelly, G., Reischl, J., Weinzierl, R., Matthews, S.

(1998) Nat Struct Biol 5: 110-114

Released	1999-03-02
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	RNA POLYMERASE (protein)

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1A1E \| pdb_00001a1e	Download File View File

C-SRC (SH2 DOMAIN) COMPLEXED WITH ACE-PHOSPHOTYR-GLU-(3-BUTYLPIPERIDINE)

Shewchuk, L., Jordan, S.

(1997) Biochemistry 36: 6283-6293

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	ACE-PHOSPHOTYR-GLU-(3-BUTYLPIPERIDINE) (protein) C-SRC TYROSINE KINASE (protein)

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1A28 \| pdb_00001a28	Download File View File

HORMONE-BOUND HUMAN PROGESTERONE RECEPTOR LIGAND-BINDING DOMAIN

Sigler, P.B., Williams, S.P.

(1998) Nature 393: 392-396

Released	1998-07-15
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	PROGESTERONE RECEPTOR (protein)
Unique Ligands	STR

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1A2B \| pdb_00001a2b	Download File View File

HUMAN RHOA COMPLEXED WITH GTP ANALOGUE

Ihara, K., Muraguchi, S., Kato, M., Shimizu, T., Shirakawa, M., Kuroda, S., Kaibuchi, K., Hakoshima, T.

(1998) J Biological Chem 273: 9656-9666

Released	1998-06-17
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	TRANSFORMING PROTEIN RHOA (protein)
Unique Ligands	GSP, MG

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1A30 \| pdb_00001a30	Download File View File

HIV-1 PROTEASE COMPLEXED WITH A TRIPEPTIDE INHIBITOR

Louis, J.M., Dyda, F., Nashed, N.T., Kimmel, A.R., Davies, D.R.

(1998) Biochemistry 37: 2105-2110

Released	1998-04-29
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 PROTEASE (protein) TRIPEPTIDE GLU-ASP-LEU (protein)

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1A41 \| pdb_00001a41	Download File View File

TYPE 1-TOPOISOMERASE CATALYTIC FRAGMENT FROM VACCINIA VIRUS

Cheng, C., Kussie, P., Pavletich, N., Shuman, S.

(1998) Cell 92: 841-850

Released	1999-06-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Vaccinia virus
Macromolecule	TOPOISOMERASE I (protein)
Unique Ligands	SO4

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1A4P \| pdb_00001a4p	Download File View File

P11 (S100A10), LIGAND OF ANNEXIN II

Rety, S., Sopkova, J., Renouard, M., Osterloh, D., Gerke, V., Russo-Marie, F., Lewit-Bentley, A.

(1999) Nat Struct Biol 6: 89-95

Released	1998-05-27
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	S100A10 (protein)

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1A5R \| pdb_00001a5r	Download File View File

STRUCTURE DETERMINATION OF THE SMALL UBIQUITIN-RELATED MODIFIER SUMO-1, NMR, 10 STRUCTURES

Bayer, P., Arndt, A., Metzger, S., Mahajan, R., Melchior, F., Jaenicke, R., Becker, J.

(1998) J Mol Biology 280: 275-286

Released	1998-10-14
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SUMO-1 (protein)

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1A6Y \| pdb_00001a6y	Download File View File

REVERBA ORPHAN NUCLEAR RECEPTOR/DNA COMPLEX

Zhao, Q., Khorasanizadeh, S., Rastinejad, F.

(1998) Mol Cell 1: 849-861

Released	1998-10-21
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	ORPHAN NUCLEAR RECEPTOR NR1D1 (protein) DNA (5'-D(CPAPAPCPTPAPGPGPTPCPAPCP(5IT)PAPGPGPTPCPAPG)-3') (nucleic acid) DNA (5'-D(CPTPGPAPCPCPTPAPGPTPGPAPCPCPTPAPGPTPTPG)-3') (nucleic acid)
Unique Ligands	ZN