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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 195 Polymer Entities.

Refinements

Structure Determination Methodology

experimental (195)

Scientific Name of Source Organism

	Chikungunya virus (165)
	Chikungunya virus strain S27-African prototype (22)
	Chikungunya virus strain Senegal 37997 (8)
	Mus musculus (8)
	Homo sapiens (6)
	synthetic construct (3)
	Anas platyrhynchos (1)
	Onyong-nyong virus (1)
	in vitro transcription vector pT7-TP(deltai) (1)

Taxonomy

	Riboviria (195)
	Eukaryota (15)
	other sequences (3)

Experimental Method

	X-RAY DIFFRACTION (156)
	ELECTRON MICROSCOPY (36)
	SOLUTION NMR (3)

Polymer Entity Type

	Protein (195)
	RNA (5)

Refinement Resolution (Å)

	1.0 - 1.5 (89)
	1.5 - 2.0 (52)
	2.0 - 2.5 (16)
	2.5 - 3.0 (11)
	3.0 - 3.5 (8)
	3.5 - 4.0 (1)
	4.0 - 4.5 (2)
	> 4.5 (13)

Release Date

	2005 - 2009 (3)
	2010 - 2014 (11)
	2015 - 2019 (10)
	2020 - 2024 (171)

Enzyme Classification Name

	Hydrolases (148)
	Transferases (13)

Membrane Protein Annotation

	OPM (8)
	MemProtMD (6)
	PDBTM (6)

Symmetry Type

	Asymmetric (167)
	Cyclic (14)
	Icosahedral (12)
	Dihedral (2)
	Helical (1)

SCOP Classification

	All beta proteins (7)
	Membrane and cell surface proteins and peptides (5)
	Artifacts (3)

AllSelected

1 to 25 of 195 Polymer Entities

Page 1 of 8

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2RSW \| pdb_00002rsw	Download File View File

NMR structure, Localization and Vesicle fusion of Chikungunya virus Fusion peptide

Mohanram, H., Bhattacharjya, S.

(2012) Biochemistry 51: 7863-7872

Released	2012-09-12
Method	SOLUTION NMR
Organisms	Chikungunya virus strain S27-African prototype
Macromolecule	peptide from E1 envelope glycoprotein (protein)

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2XFB \| pdb_00002xfb	Download File View File

CHIKUNGUNYA E1 E2 ENVELOPE GLYCOPROTEINS FITTED IN SINDBIS VIRUS cryo- EM MAP

Voss, J.E., Vaney, M.C., Duquerroy, S., Rey, F.A.

(2010) Nature 468: 709

Released	2010-11-24
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Chikungunya virus
Macromolecule	E1 ENVELOPE GLYCOPROTEIN (protein) E2 ENVELOPE GLYCOPROTEIN (protein)

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2XFC \| pdb_00002xfc	Download File View File

CHIKUNGUNYA E1 E2 ENVELOPE GLYCOPROTEINS FITTED IN SEMLIKI FOREST VIRUS cryo-EM MAP

Voss, J.E., Vaney, M.C., Duquerroy, S., Rey, F.A.

(2010) Nature 468: 709

Released	2010-11-24
Method	ELECTRON MICROSCOPY 9 Å
Organisms	Chikungunya virus
Macromolecule	E1 ENVELOPE GLYCOPROTEIN (protein) E2 ENVELOPE GLYCOPROTEIN (protein)

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3GPG \| pdb_00003gpg	Download File View File

Crystal structure of macro domain of Chikungunya virus

Malet, H., Jamal, S., Coutard, B., Canard, B.

(2009) J Virol 83: 6534-6545

Released	2009-07-21
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Chikungunya virus strain S27-African prototype
Macromolecule	Non-structural protein 3 (protein)

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3GPO \| pdb_00003gpo	Download File View File

Crystal structure of macro domain of Chikungunya virus in complex with ADP-ribose

Malet, H., Jamal, S., Coutard, B., Canard, B.

(2009) J Virol 83: 6534-6545

Released	2009-07-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Chikungunya virus strain S27-African prototype
Macromolecule	Non-structural protein 3 (protein)
Unique Ligands	APR

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3GPQ \| pdb_00003gpq	Download File View File

Crystal structure of macro domain of Chikungunya virus in complex with RNA

Malet, H., Jamal, S., Coutard, B., Canard, B.

(2009) J Virol 83: 6534-6545

Released	2009-07-21
Method	X-RAY DIFFRACTION 2 Å
Organisms	Chikungunya virus strain S27-African prototype
Macromolecule	Non-structural protein 3 (protein) RNA (5'-R(APAP*A)-3') (nucleic acid)

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3J2W \| pdb_00003j2w	Download File View File

Electron cryo-microscopy of Chikungunya virus

Sun, S., Xiang, Y., Rossmann, M.G.

(2013) Elife 2: e00435-e00435

Released	2013-04-24
Method	ELECTRON MICROSCOPY 5 Å
Organisms	Chikungunya virus strain Senegal 37997
Macromolecule	Unique protein chains: 6

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3N40 \| pdb_00003n40	Download File View File

Crystal structure of the immature envelope glycoprotein complex of Chikungunya virus.

Voss, J., Vaney, M.C., Duquerroy, S., Rey, F.A.

(2010) Nature 468: 709-712

Released	2010-12-01
Method	X-RAY DIFFRACTION 2.17 Å
Organisms	Chikungunya virus
Macromolecule	E1 envelope glycoprotein (protein) P62 envelope glycoprotein (protein)
Unique Ligands	ACT, NAG
Unique branched monosaccharides	NAG, NDG

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3N41 \| pdb_00003n41	Download File View File

Crystal structure of the mature envelope glycoprotein complex (spontaneous cleavage) of Chikungunya virus.

Voss, J., Vaney, M.C., Duquerroy, S., Rey, F.A.

(2010) Nature 468: 709-712

Released	2010-12-01
Method	X-RAY DIFFRACTION 3.01 Å
Organisms	Chikungunya virus
Macromolecule	E1 envelope glycoprotein (protein) E2 envelope glycoprotein (protein) E3 envelope glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG, NDG

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3N42 \| pdb_00003n42	Download File View File

Crystal structures of the mature envelope glycoprotein complex (furin cleavage) of Chikungunya virus.

Voss, J., Vaney, M.C., Duquerroy, S., Rey, F.A.

(2010) Nature 468: 709-712

Released	2010-12-01
Method	X-RAY DIFFRACTION 3 Å
Organisms	Chikungunya virus
Macromolecule	E1 envelope glycoprotein (protein) E2 envelope glycoprotein (protein) E3 envelope glycoprotein (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG, NDG

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3N43 \| pdb_00003n43	Download File View File

Crystal structures of the mature envelope glycoprotein complex (trypsin cleavage) of Chikungunya virus.

Voss, J., Vaney, M.C., Duquerroy, S., Rey, F.A.

(2010) Nature 468: 709-712

Released	2010-12-01
Method	X-RAY DIFFRACTION 2.58 Å
Organisms	Chikungunya virus
Macromolecule	E1 envelope glycoprotein (protein) E2 envelope glycoprotein (protein) E3 envelope glycoprotein (protein)
Unique Ligands	ACT, NAG
Unique branched monosaccharides	NAG, NDG

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3N44 \| pdb_00003n44	Download File View File

Crystal structure of the mature envelope glycoprotein complex (trypsin cleavage; Osmium soak) of Chikungunya virus.

Voss, J., Vaney, M.C., Duquerroy, S., Rey, F.A.

(2010) Nature 468: 709-712

Released	2010-12-01
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Chikungunya virus
Macromolecule	E1 envelope glycoprotein (protein) E2 envelope glycoprotein (protein) E3 envelope glycoprotein (protein)
Unique Ligands	ACT, NAG, OS

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3TRK \| pdb_00003trk	Download File View File

Structure of the Chikungunya virus nsP2 protease

Cheung, J., Franklin, M., Mancia, F., Rudolph, M., Cassidy, M., Gary, E., Burshteyn, F., Love, J.

To be published

Released	2011-09-28
Method	X-RAY DIFFRACTION 2.397 Å
Organisms	Chikungunya virus
Macromolecule	Nonstructural polyprotein (protein)
Unique Ligands	NA

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4TU0 \| pdb_00004tu0	Download File View File

CRYSTAL STRUCTURE OF CHIKUNGUNYA VIRUS NSP3 MACRO DOMAIN IN COMPLEX WITH A 2'-5' OLIGOADENYLATE TRIMER

Morin, B., Ferron, f.p., Malet, h., Coutard, b., Canard, b.

To be published

Released	2014-07-09
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Chikungunya virus synthetic construct
Macromolecule	Non-structural polyprotein 3 (protein) 2'-5' OLIGOADENYLATE TRIMER (nucleic acid)
Unique Ligands	PEG

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4ZTB \| pdb_00004ztb	Download File View File

Crystal structure of nsP2 protease from Chikungunya virus in P212121 space group at 2.59 A (4molecules/ASU).

Narwal, M., Pratap, S., Singh, H., Kumar, P., Tomar, S.

(2018) Int J Biol Macromol 116: 451-462

Released	2016-06-15
Method	X-RAY DIFFRACTION 2.59 Å
Organisms	Chikungunya virus
Macromolecule	Protease nsP2 (protein)
Unique Ligands	GOL

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5ANY \| pdb_00005any	Download File View File

Electron cryo-microscopy of chikungunya virus in complex with neutralizing antibody Fab CHK265

Fox, J.M., Long, F., Edeling, M.A., Lin, H., Duijl-Richter, M., Fong, R.H., Kahle, K.M., Smit, J.M., Jin, J., Simmons, G., Doranz, B.J., Crowe, J.E., Fremont, D.H., Rossmann, M.G., Diamond, M.S.

(2015) Cell 163: 1095

Released	2015-11-25
Method	ELECTRON MICROSCOPY 16.9 Å
Organisms	Chikungunya virus Mus musculus
Macromolecule	E1 (protein) E2 (protein) FAB (protein) FAB CHK265 (protein)

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5H23 \| pdb_00005h23	Download File View File

Crystal structure of Chikungunya virus capsid protein

Sharma, R., Kesari, P., Tomar, S., Kumar, P.

(2018) Virology 515: 223-234

Released	2018-03-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Chikungunya virus
Macromolecule	Capsid Protein (protein)
Unique Ligands	BOG, EDO, GOL, PEG

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5I22 \| pdb_00005i22	Download File View File

Amphiphysin SH3 in complex with Chikungunya virus nsP3 peptide

Tossavainen, H., Aitio, O., Hellman, M., Saksela, K., Permi, P.

(2016) J Biological Chem 291: 16307-16317

Released	2016-06-15
Method	SOLUTION NMR
Organisms	Chikungunya virus Homo sapiens
Macromolecule	CHIKV nsP3 peptide (protein) Myc box-dependent-interacting protein 1 (protein)

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5VU2 \| pdb_00005vu2	Download File View File

Electron cryo-microscopy of "immature" Chikungunya VLP

Rossmann, M.G., Yap, M.L.

(2017) Proc Natl Acad Sci U S A 114: 13703-13707

Released	2017-12-06
Method	ELECTRON MICROSCOPY 6.8 Å
Organisms	Chikungunya virus strain Senegal 37997
Macromolecule	E1 envelope glycoprotein (protein) E2 envelope glycoprotein (protein) E3 envelope glycoprotein (protein) capsid protein (protein)

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6JIM \| pdb_00006jim	Download File View File

Viral helicase protein

Law, Y.S.

(2019) Proc Natl Acad Sci U S A 116: 9558-9567

Released	2019-04-10
Method	X-RAY DIFFRACTION 2 Å
Organisms	Chikungunya virus
Macromolecule	helicase (protein) RNA (5'-R(PUPUPUPUP*UP)-3') (nucleic acid)
Unique Ligands	ADP, AL, CL, F, GOL, MG

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6JO8 \| pdb_00006jo8	Download File View File

The complex structure of CHIKV envelope glycoprotein bound to human MXRA8

Song, H., Zhao, Z., Qi, J., Gao, F., Gao, F.G.

(2019) Cell 177: 1714-1724.e12

Released	2019-05-15
Method	X-RAY DIFFRACTION 3.495 Å
Organisms	Chikungunya virus Homo sapiens
Macromolecule	CHIKV E1 (protein) Matrix remodeling-associated protein 8 (protein) Togavirin (protein)
Unique Ligands	NAG
Unique branched monosaccharides	NAG, NDG

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6NK5 \| pdb_00006nk5	Download File View File

Electron Cryo-Microscopy Of Chikungunya VLP

Basore, K., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)

(2019) Cell 177: 1725

Released	2019-05-22
Method	ELECTRON MICROSCOPY 4.16 Å
Organisms	Chikungunya virus strain Senegal 37997
Macromolecule	Capsid protein (protein) E1 glycoprotein (protein) E2 glycoprotein (protein)
Unique Ligands	NAG

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6NK6 \| pdb_00006nk6	Download File View File

Electron Cryo-Microscopy Of Chikungunya VLP in complex with mouse Mxra8 receptor

Basore, K., Kim, A.S., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)

(2019) Cell 177: 1725

Released	2019-05-22
Method	ELECTRON MICROSCOPY 4.06 Å
Organisms	Chikungunya virus strain Senegal 37997 Mus musculus
Macromolecule	Capsid protein (protein) E1 glycoprotein (protein) E2 glycoprotein (protein) Matrix remodeling-associated protein 8 (protein)
Unique Ligands	NAG

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6NK7 \| pdb_00006nk7	Download File View File

Electron Cryo-Microscopy of Chikungunya in Complex with Mouse Mxra8 Receptor

Basore, K., Kim, A.S., Nelson, C.A., Fremont, D.H., Center for Structural Genomics of Infectious Diseases (CSGID)

(2019) Cell 177: 1725

Released	2019-05-22
Method	ELECTRON MICROSCOPY 4.99 Å
Organisms	Chikungunya virus Mus musculus
Macromolecule	Capsid protein (protein) E1 glycoprotein (protein) E2 glycoprotein (protein) E3 glycoprotein (protein) Matrix remodeling-associated protein 8 (protein)
Unique Ligands	NAG