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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Yang, C."

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Search Summary

This query matches 297 Structures.

Refinements

Structure Determination Methodology

experimental (297)

Scientific Name of Source Organism

	Homo sapiens (97)
	synthetic construct (45)
	Saccharomyces cerevisiae (24)
	Methanosarcina mazei Go1 (18)
	Mycobacterium tuberculosis H37Rv (11)
	Clostridium perfringens (8)
	Escherichia coli K-12 (8)
	African swine fever virus (7)
	Mus musculus (7)
	Pseudomonas aeruginosa (7)

More...

Taxonomy

	Eukaryota (157)
	Bacteria (88)
	other sequences (45)
	Riboviria (33)
	Archaea (21)
	Varidnaviria (12)
	unclassified sequences (7)
	Duplodnaviria (3)
	Monodnaviria (2)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (226)
	ELECTRON MICROSCOPY (67)
	SOLUTION NMR (4)

Polymer Entity Type

	Protein (287)
	DNA (59)
	RNA (4)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (21)
	1.5 - 2.0 (45)
	2.0 - 2.5 (102)
	2.5 - 3.0 (60)
	3.0 - 3.5 (30)
	3.5 - 4.0 (23)
	4.0 - 4.5 (7)
	> 4.5 (3)

Release Date

	1985 - 1989 (1)
	1995 - 1999 (2)
	2000 - 2004 (15)
	2005 - 2009 (16)
	2010 - 2014 (40)
	2015 - 2019 (74)
	2020 - 2024 (120)
	2025 - 2029 (29)

Enzyme Classification Name

	Hydrolases (64)
	Transferases (50)
	Lyases (29)
	Oxidoreductases (17)
	Isomerases (14)
	Translocases (1)
	Ligases (4)

Membrane Protein Annotation

	PDBTM (27)
	mpstruc (13)
	MemProtMD (18)
	OPM (5)

Symmetry Type

	Asymmetric (187)
	Cyclic (84)
	Dihedral (15)
	Icosahedral (9)
	Tetrahedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (38)
	Alpha and beta proteins (a/b) (16)
	Artifacts (15)
	All beta proteins (10)
	All alpha proteins (15)
	Multi-domain proteins (alpha and beta) (7)
	Small proteins (1)

AllSelected

1 to 25 of 297 Structures

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1BQJ \| pdb_00001bqj	Download File View File

CRYSTAL STRUCTURE OF D(ACCCT)

Weil, J., Min, T., Yang, C., Wang, S., Sutherland, C., Sinha, N., Kang, C.H.

(1999) Acta Crystallogr D Biol Crystallogr 55: 422-429

Released	1999-03-18
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(APCPCPCP*T)-3') (nucleic acid)

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1CN0 \| pdb_00001cn0	Download File View File

CRYSTAL STRUCTURE OF D(ACCCT)

Weil, J., Min, T., Cheng, Y., Wang, S., Sutherland, C., Sinha, N., Kang, C.

(1999) Acta Crystallogr D Biol Crystallogr 55: 422-429

Released	2000-05-24
Method	X-RAY DIFFRACTION 2.2 Å
Macromolecule	DNA (5'-D(APCPCPCP*T)-3') (nucleic acid)

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1JF3 \| pdb_00001jf3	Download File View File

Crystal Structure Of Component III Glycera Dibranchiata Monomeric Hemoglobin

Park, H.J., Yang, C., Treff, N., Satterlee, J.D., Kang, C.H.

(2002) Proteins 49: 49-60

Released	2002-06-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycera dibranchiata
Macromolecule	monomer hemoglobin component III (protein)
Unique Ligands	HEM

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1JF4 \| pdb_00001jf4	Download File View File

Crystal Structure Of Component IV Glycera Dibranchiata Monomeric Hemoglobin

Park, H.J., Yang, C., Treff, N., Satterlee, J.D., Kang, C.H.

(2002) Proteins 49: 49-60

Released	2002-06-20
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycera dibranchiata
Macromolecule	monomer hemoglobin component IV (protein)
Unique Ligands	HEM

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1JL6 \| pdb_00001jl6	Download File View File

Crystal Structure of CN-Ligated Component IV Glycera Dibranchiata Monomeric Hemoglobin

Park, H.J., Yang, C., Treff, N., Satterlee, J.D., Kang, C.

(2002) Proteins 49: 49-60

Released	2002-07-16
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycera dibranchiata
Macromolecule	monomer hemoglobin component IV (protein)
Unique Ligands	CYN, HEM

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1JL7 \| pdb_00001jl7	Download File View File

Crystal Structure Of CN-Ligated Component III Glycera Dibranchiata Monomeric Hemoglobin

Park, H.J., Yang, C., Treff, N., Satterlee, J.D., Kang, C.

(2002) Proteins 49: 49-60

Released	2002-07-16
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Glycera dibranchiata
Macromolecule	Monomer hemoglobin component III (protein)
Unique Ligands	CYN, HEM

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1LLC \| pdb_00001llc	Download File View File

STRUCTURE DETERMINATION OF THE ALLOSTERIC L-LACTATE DEHYDROGENASE FROM LACTOBACILLUS CASEI AT 3.0 ANGSTROMS RESOLUTION

Buehner, M., Hecht, H.J., Hensel, R.

(1984) Acta Crystallogr A 40: 32-32

Released	1989-07-12
Method	X-RAY DIFFRACTION 3 Å
Organisms	Lacticaseibacillus casei
Macromolecule	L-LACTATE DEHYDROGENASE (protein)
Unique Ligands	AFP, SO4

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1R9O \| pdb_00001r9o	Download File View File

Crystal Structure of P4502C9 with Flurbiprofen bound

Wester, M.R., Yano, J.K., Schoch, G.A., Griffin, K.J., Stout, C.D., Johnson, E.F.

(2004) J Biological Chem 279: 35630-35637

Released	2004-06-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Cytochrome P450 2C9 (protein)
Unique Ligands	FLP, GOL, HEM

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1SQD \| pdb_00001sqd	Download File View File

Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases

Yang, C., Pflugrath, J.W., Camper, D.L., Foster, M.L., Pernich, D.J., Walsh, T.A.

(2004) Biochemistry 43: 10414-10423

Released	2004-08-17
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arabidopsis thaliana
Macromolecule	4-hydroxyphenylpyruvate dioxygenase (protein)
Unique Ligands	FE

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1SQI \| pdb_00001sqi	Download File View File

Structural basis for inhibitor selectivity revealed by crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases

Yang, C., Pflugrath, J.W., Camper, D.L., Foster, M.L., Pernich, D.J., Walsh, T.A.

(2004) Biochemistry 43: 10414-10423

Released	2004-08-17
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Rattus norvegicus
Macromolecule	4-hydroxyphenylpyruvic acid dioxygenase (protein)
Unique Ligands	869, FE

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1TFZ \| pdb_00001tfz	Download File View File

Structural basis for herbicidal inhibitor selectivity revealed by comparison of crystal structures of plant and mammalian 4-hydroxyphenylpyruvate dioxygenases

Yang, C., Pflugrath, J.W., Camper, D.L., Foster, M.L., Pernich, D.J., Walsh, T.A.

(2004) Biochemistry 43: 10414-10423

Released	2004-08-17
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arabidopsis thaliana
Macromolecule	4-hydroxyphenylpyruvate dioxygenase (protein)
Unique Ligands	869, FE

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1TG5 \| pdb_00001tg5	Download File View File

Crystal structures of plant 4-hydroxyphenylpyruvate dioxygenases complexed with DAS645

Yang, C., Pflugrath, J.W., Camper, D.L., Foster, M.L., Pernich, D.J., Walsh, T.A.

(2004) Biochemistry 43: 10414-10423

Released	2004-08-17
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Arabidopsis thaliana
Macromolecule	4-hydroxyphenylpyruvate dioxygenase (protein)
Unique Ligands	645, FE2

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1TK1 \| pdb_00001tk1	Download File View File

YEAST OXYGEN-DEPENDENT COPROPORPHYRINOGEN OXIDASE

Phillips, J.D., Whitby, F.G., Warby, C.A., Labbe, P., Yang, C., Pflugrath, J.W., Ferrara, J.D., Robinson, H., Kushner, J.P., Hill, C.P.

(2004) J Biological Chem 279: 38960-38968

Released	2004-07-20
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Coproporphyrinogen III oxidase (protein)

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1TKL \| pdb_00001tkl	Download File View File

Yeast Oxygen-Dependent Coproporphyrinogen Oxidase

Phillips, J.D., Whitby, F.G., Warby, C.A., Labbe, P., Yang, C., Pflugrath, J.W., Ferrara, J.D., Robinson, H., Kushner, J.P., Hill, C.P.

(2004) J Biological Chem 279: 38960-38968

Released	2004-07-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Coproporphyrinogen III oxidase (protein)

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1TLB \| pdb_00001tlb	Download File View File

Yeast coproporphyrinogen oxidase

Phillip, J.D., Whitby, F.G., Warby, C.A., Labbe, P., Yang, C., Pflugrath, J.W., Ferrara, J.D., Robinson, H., Kushner, J.P., Hill, C.P.

(2004) J Biological Chem 279: 38960-38968

Released	2004-07-20
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	Coproporphyrinogen III oxidase (protein)
Unique Ligands	SO4

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1XHO \| pdb_00001xho	Download File View File

Chorismate mutase from Clostridium thermocellum Cth-682

Xu, H., Chen, L., Lee, D., Habel, J.E., Nguyen, J., Chang, S.-H., Kataeva, I., Chang, J., Zhao, M., Yang, H., Horanyi, P., Florence, Q., Tempel, W., Zhou, W., Lin, D., Zhang, H., Praissman, J., Arendall III, W.B., Richardson, J.S., Richardson, D.C., Ljungdahl, L., Liu, Z.-J., Rose, J.P., Wang, B.-C., Southeast Collaboratory for Structural Genomics (SECSG)

(2005) Acta Crystallogr D Biol Crystallogr 61: 960-966

Released	2004-11-23
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Acetivibrio thermocellus
Macromolecule	Chorismate mutase (protein)
Unique Ligands	UNX

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1XO5 \| pdb_00001xo5	Download File View File

Crystal structure of CIB1, an EF-hand, integrin and kinase-binding protein

Gentry, H.R., Singer, A.U., Betts, L., Yang, C., Ferrara, J.D., Parise, L.V., Sondek, J.

(2005) J Biological Chem 280: 8407-8415

Released	2004-12-07
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Homo sapiens
Macromolecule	Calcium and integrin-binding protein 1 (protein)
Unique Ligands	CA

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1YB0 \| pdb_00001yb0	Download File View File

Structure of PlyL

Low, L.Y., Yang, C., Perego, M., Osterman, A., Liddington, R.C.

(2005) J Biological Chem 280: 35433-35439

Released	2005-08-23
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Bacillus anthracis
Macromolecule	prophage LambdaBa02, N-acetylmuramoyl-L-alanine amidase, family 2 (protein)
Unique Ligands	PO4, ZN

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1YY4 \| pdb_00001yy4	Download File View File

Crystal structure of estrogen receptor beta complexed with 1-chloro-6-(4-hydroxy-phenyl)-naphthalen-2-ol

Mewshaw, R.E., Edsall Jr., R.J., Yang, C., Manas, E.S., Xu, Z.B., Henderson, R.A., Keith Jr., J.C., Harris, H.A.

(2005) J Med Chem 48: 3953-3979

Released	2006-02-28
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor beta (protein) STEROID RECEPTOR COACTIVATOR-1 (protein)
Unique Ligands	4NA

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1YYE \| pdb_00001yye	Download File View File

Crystal structure of estrogen receptor beta complexed with way-202196

Mewshaw, R.E., Edsall Jr., R.J., Yang, C., Manas, E.S., Xu, Z.B., Henderson, R.A., Keith Jr., J.C., Harris, H.A.

(2005) J Med Chem 48: 3953-3979

Released	2006-02-28
Method	X-RAY DIFFRACTION 2.03 Å
Organisms	Homo sapiens
Macromolecule	Estrogen receptor beta (protein) STEROID RECEPTOR COACTIVATOR-1 (protein)
Unique Ligands	196

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2AR3 \| pdb_00002ar3	Download File View File

E90A mutant structure of PlyL

Low, L.Y., Yang, C., Perego, M., Osterman, A., Liddington, R.C.

(2005) J Biological Chem 280: 35433-35439

Released	2006-06-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus anthracis
Macromolecule	prophage lambdaba02, n-acetylmuramoyl-l-alanine amidase, family 2 (protein)
Unique Ligands	PO4, ZN

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2AZP \| pdb_00002azp	Download File View File

Crystal Structure of PA1268 Solved by Sulfur SAD

Liu, Y., Gorodichtchenskaia, E., Skarina, T., Yang, C., Joachimiak, A., Edwards, A., Pai, E.F., Savchenko, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2005-12-20
Method	X-RAY DIFFRACTION 2.13 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	hypothetical protein PA1268 (protein)

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2JE2 \| pdb_00002je2	Download File View File

Cytochrome P460 from Nitrosomonas europaea - probable nonphysiological oxidized form

Pearson, A.R., Elmore, B.O., Yang, C., Ferrara, J.D., Hooper, A.B., Wilmot, C.M.

(2007) Biochemistry 46: 8340

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Nitrosomonas europaea
Macromolecule	CYTOCHROME P460 (protein)
Unique Ligands	HEC, PO4

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2JE3 \| pdb_00002je3	Download File View File

Cytochrome P460 from Nitrosomonas europaea - probable physiological form

Pearson, A.R., Elmore, B.O., Yang, C., Ferrara, J.D., Hooper, A.B., Wilmot, C.M.

(2007) Biochemistry 46: 8340

Released	2007-07-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Nitrosomonas europaea
Macromolecule	CYTOCHROME P460 (protein)
Unique Ligands	HEC, PO4

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2JK7 \| pdb_00002jk7	Download File View File

XIAP BIR3 bound to a Smac Mimetic

Saito, N.G., Meagher, J.L., Stuckey, J.A.

(2008) J Med Chem 51: 7169

Released	2008-11-04
Method	X-RAY DIFFRACTION 2.82 Å
Organisms	Homo sapiens
Macromolecule	BACULOVIRAL IAP REPEAT-CONTAINING PROTEIN 4 (protein)
Unique Ligands	BI6, ZN

1 to 25 of 297 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1BQJ | pdb_00001bqj

1CN0 | pdb_00001cn0

1JF3 | pdb_00001jf3

1JF4 | pdb_00001jf4

1JL6 | pdb_00001jl6

1JL7 | pdb_00001jl7

1LLC | pdb_00001llc

1R9O | pdb_00001r9o

1SQD | pdb_00001sqd

1SQI | pdb_00001sqi

1TFZ | pdb_00001tfz

1TG5 | pdb_00001tg5

1TK1 | pdb_00001tk1

1TKL | pdb_00001tkl

1TLB | pdb_00001tlb

1XHO | pdb_00001xho

1XO5 | pdb_00001xo5

1YB0 | pdb_00001yb0

1YY4 | pdb_00001yy4

1YYE | pdb_00001yye

2AR3 | pdb_00002ar3

2AZP | pdb_00002azp

2JE2 | pdb_00002je2

2JE3 | pdb_00002je3

2JK7 | pdb_00002jk7