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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Smith, M.J."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Homo sapiens (13)
	synthetic construct (2)
	Mus musculus (1)

Taxonomy

	Eukaryota (13)
	other sequences (2)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

Protein (13)

Refinement Resolution (Å)

	1.0 - 1.5 (9)
	1.5 - 2.0 (1)
	2.0 - 2.5 (2)
	2.5 - 3.0 (1)

Release Date

	2010 - 2014 (2)
	2015 - 2019 (11)

Enzyme Classification Name

	Transferases (4)
	Hydrolases (5)
	Isomerases (1)

Symmetry Type

Asymmetric (13)

SCOP Classification

	Alpha and beta proteins (a/b) (1)
	Artifacts (1)

AllSelected

1 to 13 of 13 Structures

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4JMG	Download File View File

Crystal structure of the synthetic protein in complex with pY peptide

Yasui, N., Smith, L., Koide, S.

(2014) Mol Cell 54: 1034-1041

Released	2014-04-23
Method	X-RAY DIFFRACTION 1.403 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Clamp Ptpn11_pY580 (protein) Tyrosine-protein phosphatase non-receptor type 11 (protein)
Unique Ligands	MG

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4JMH	Download File View File

Crystal structure of synthetic protein in complex with double pY peptide

Yasui, N., Smith, L., Koide, S.

(2014) Mol Cell 54: 1034-1041

Released	2014-04-23
Method	X-RAY DIFFRACTION 2.408 Å
Organisms	Homo sapiens synthetic construct
Macromolecule	Clamp Shc1_pY239/240 (protein) SHC-transforming protein 1 (protein)

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5NNC	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated histone 4 peptide (H3K9ac/K14ac)

Filippakopoulos, P., Picaud, S., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-05-16
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) Histone H3 (protein)

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5NND	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated histone 4 peptide (H3K9ac/K14ac)

Filippakopoulos, P., Picaud, S., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.82 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) Histone H3 (protein)
Unique Ligands	EDO

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5NNE	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with a diacetylated TOP2A peptide (K1201ac/K1204ac)

Filippakopoulos, P., Picaud, S., Krojer, T., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) GKA(ALY)GK(ALY)TQMY (protein)
Unique Ligands	EDO

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5NNF	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated BAZ1B peptide (K221ac)

Filippakopoulos, P., Picaud, S., Krojer, T., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.15 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) FLPH(ALY)YDVKL (protein)

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5NNG	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated SRPK1 peptide (K585ac)

Filippakopoulos, P., Picaud, S., Newman, J., Sorrell, F., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C., Structural Genomics Consortium (SGC)

(2019) Mol Cell 73: 621-638.e17

Released	2018-05-16
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) VAG(ALY)YS(ALY)EFFY (protein)
Unique Ligands	EDO

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6AMB	Download File View File

Crystal Structure of the Afadin RA1 domain in complex with HRAS

Smith, M.J., Ishiyama, N., Ikura, M.

(2017) Nat Commun 8: 1099-1099

Released	2017-11-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Afadin (protein) GTPase HRas (protein)
Unique Ligands	GNP, MG

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6G0O	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated ATRX peptide (K1030ac/K1033ac)

Filippakopoulos, P., Picaud, S., Newman, J., Sorrell, F., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-11-28
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) Transcriptional regulator ATRX (protein)
Unique Ligands	EDO

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6G0P	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated E2F1 peptide (K117ac/K120ac)

Filippakopoulos, P., Picaud, S., Krojer, T., Sorrell, F., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-11-28
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) Transcription factor E2F1 (protein)
Unique Ligands	EDO

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6G0Q	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated GATA1 peptide (K312ac/K315ac)

Filippakopoulos, P., Picaud, S., Newman, J., Sorrell, F., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-11-28
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) Erythroid transcription factor (protein)
Unique Ligands	EDO

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6G0R	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated POLR2A peptide (K775ac/K778ac)

Filippakopoulos, P., Picaud, S., Pike, A.C.W., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-11-28
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) DNA-directed RNA polymerase II subunit RPB1 (protein)
Unique Ligands	EDO

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6G0S	Download File View File

Crystal Structure of the first bromodomain of human BRD4 in complex with an acetylated SIRT7 peptide (K272ac/K275ac)

Filippakopoulos, P., Picaud, S., Krojer, T., von Delft, F., Arrowsmith, C.H., Edwards, A.M., Bountra, C.

(2019) Mol Cell 73: 621-638.e17

Released	2018-11-28
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Homo sapiens
Macromolecule	Bromodomain-containing protein 4 (protein) NAD-dependent protein deacetylase sirtuin-7 (protein)
Unique Ligands	EDO