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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Legrand, J.-F."

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Search Summary

This query matches 226 Structures.

Refinements

Structure Determination Methodology

experimental (226)

Scientific Name of Source Organism

	Homo sapiens (59)
	Rattus norvegicus (18)
	synthetic construct (15)
	Human immunodeficiency virus 1 (12)
	Mus musculus (10)
	Escherichia coli K-12 (9)
	Mycobacterium tuberculosis H37Rv (8)
	Arabidopsis thaliana (6)
	Drosophila melanogaster (5)
	Escherichia coli (5)

More...

Taxonomy

	Eukaryota (117)
	Bacteria (92)
	Riboviria (19)
	other sequences (15)
	Archaea (5)
	Duplodnaviria (4)
	Eukaryota (eukaryotes) (3)
	Varidnaviria (3)
	unclassified sequences (2)

Experimental Method

X-RAY DIFFRACTION (226)

Polymer Entity Type

	Protein (218)
	DNA (16)
	RNA (7)

Refinement Resolution (Å)

	0.5 - 1.0 (1)
	1.0 - 1.5 (10)
	1.5 - 2.0 (52)
	2.0 - 2.5 (76)
	2.5 - 3.0 (49)
	3.0 - 3.5 (30)
	3.5 - 4.0 (4)
	4.0 - 4.5 (3)
	> 4.5 (1)

Release Date

	1995 - 1999 (4)
	2000 - 2004 (15)
	2005 - 2009 (41)
	2010 - 2014 (66)
	2015 - 2019 (52)
	2020 - 2024 (45)
	2025 - 2029 (3)

Enzyme Classification Name

	Transferases (35)
	Hydrolases (31)
	Ligases (4)
	Oxidoreductases (7)
	Isomerases (2)
	Lyases (1)

Membrane Protein Annotation

	OPM (5)
	PDBTM (5)
	MemProtMD (3)
	mpstruc (3)

Symmetry Type

	Asymmetric (119)
	Cyclic (98)
	Dihedral (22)

SCOP Classification

	All beta proteins (23)
	Alpha and beta proteins (a/b) (42)
	Alpha and beta proteins (a+b) (31)
	All alpha proteins (18)
	Artifacts (18)
	Multi-domain proteins (alpha and beta) (3)
	Small proteins (4)
	Coiled coil proteins (1)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 226 Structures

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1CI6 \| pdb_00001ci6	Download File View File

TRANSCRIPTION FACTOR ATF4-C/EBP BETA BZIP HETERODIMER

Podust, L.M., Kim, Y.

(2001) J Biological Chem 276: 505-513

Released	2000-12-04
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	TRANSCRIPTION FACTOR ATF-4 (protein) TRANSCRIPTION FACTOR C/EBP BETA (protein)
Unique Ligands	BME, FE

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1EF1 \| pdb_00001ef1	Download File View File

CRYSTAL STRUCTURE OF THE MOESIN FERM DOMAIN/TAIL DOMAIN COMPLEX

Pearson, M.A., Reczek, D., Bretscher, A., Karplus, P.A.

(2000) Cell 101: 259-270

Released	2000-05-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	MOESIN (protein)
Unique Ligands	SO4

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1G9M \| pdb_00001g9m	Download File View File

HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Kwong, P.D., Wyatt, R., Majeed, S., Robinson, J., Sweet, R.W., Sodroski, J., Hendrickson, W.A.

(2000) Structure 8: 1329-1339

Released	2000-12-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-CELL SURFACE GLYCOPROTEIN CD4 (protein)
Unique Ligands	IPA, NAG
Unique branched monosaccharides	FUC, NAG

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1GC1 \| pdb_00001gc1	Download File View File

HIV-1 GP120 CORE COMPLEXED WITH CD4 AND A NEUTRALIZING HUMAN ANTIBODY

Kwong, P.D., Wyatt, R., Robinson, J., Sweet, R.W., Sodroski, J., Hendrickson, W.A.

(1998) Nature 393: 648-659

Released	1998-07-08
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B (protein) CD4 (protein) ENVELOPE PROTEIN GP120 (protein)
Unique Ligands	NAG
Unique branched monosaccharides	FUC, NAG

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1IIC \| pdb_00001iic	Download File View File

Crystal Structure of Saccharomyces cerevisiae N-myristoyltransferase with Bound MyristoylCoA

Farazi, T.A., Waksman, G., Gordon, J.I.

(2001) Biochemistry 40: 6335-6343

Released	2001-05-02
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PEPTIDE N-myristoyltransferase (protein)
Unique Ligands	MYA

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1KJY \| pdb_00001kjy	Download File View File

Crystal Structure of Human G[alpha]i1 Bound to the GoLoco Motif of RGS14

Kimple, R.J., Kimple, M.E., Betts, L., Sondek, J., Siderovski, D.P.

(2002) Nature 416: 878-881

Released	2002-05-08
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Rattus norvegicus
Macromolecule	GUANINE NUCLEOTIDE-BINDING PROTEIN G(I), ALPHA-1 SUBUNIT (protein) REGULATOR OF G-PROTEIN SIGNALING 14 (protein)
Unique Ligands	CS, GDP, MG

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1KL9 \| pdb_00001kl9	Download File View File

Crystal structure of the N-terminal segment of Human eukaryotic initiation factor 2alpha

Nonato, M.C., Widom, J., Clardy, J.

(2002) J Biological Chem 277: 17057-17061

Released	2002-03-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 (protein)
Unique Ligands	ZN

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1KTJ \| pdb_00001ktj	Download File View File

X-ray Structure Of Der P 2, The Major House Dust Mite Allergen

Derewenda, U., Li, J., Derewenda, Z., Dauter, Z., Mueller, G.A., Rule, G.S., Benjamin, D.C.

(2002) J Mol Biology 318: 189-197

Released	2002-05-15
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Dermatophagoides pteronyssinus
Macromolecule	ALLERGEN DER P 2 (protein)

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1LYN \| pdb_00001lyn	Download File View File

CRYSTAL STRUCTURE AND SUBUNIT DYNAMICS OF THE LYSIN DIMER: EGG ENVELOPES DISSOCIATE DIMERS, THE MONOMER IS THE ACTIVE SPECIES

Shaw, A., Vacquier, V.D., Stout, C.D.

(1995) J Cell Biol 130: 1117-1125

Released	1995-06-03
Method	X-RAY DIFFRACTION 2.75 Å
Organisms	Haliotis rufescens
Macromolecule	SPERM LYSIN (protein)

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1N7U \| pdb_00001n7u	Download File View File

THE RECEPTOR-BINDING PROTEIN P2 OF BACTERIOPHAGE PRD1: CRYSTAL FORM I

Xu, L., Benson, S.D., Butcher, S.J., Bamford, D.H., Burnett, R.M.

(2003) Structure 11: 309-322

Released	2003-04-08
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Enterobacteria phage PRD1
Macromolecule	Adsorption protein P2 (protein)
Unique Ligands	ACT, CA

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1OJL \| pdb_00001ojl	Download File View File

Crystal structure of a sigma54-activator suggests the mechanism for the conformational switch necessary for sigma54 binding

Sallai, L., Tucker, P.A.

(2005) J Struct Biol 151: 160-170

Released	2005-05-19
Method	X-RAY DIFFRACTION 3 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	TRANSCRIPTIONAL REGULATORY PROTEIN ZRAR (protein)
Unique Ligands	ATP, PO4

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1RZJ \| pdb_00001rzj	Download File View File

HIV-1 HXBC2 GP120 ENVELOPE GLYCOPROTEIN COMPLEXED WITH CD4 AND INDUCED NEUTRALIZING ANTIBODY 17B

Huang, C.C., Venturi, M., Majeed, S., Moore, M.J., Phogat, S., Zhang, M.-Y., Dimitrov, D.S., Hendrickson, W.A., Robinson, J., Sodroski, J., Wyatt, R., Choe, H., Farzan, M., Kwong, P.D.

(2004) Proc Natl Acad Sci U S A 101: 2706-2711

Released	2004-02-03
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Human immunodeficiency virus 1
Macromolecule	ANTIBODY 17B, HEAVY CHAIN (protein) ANTIBODY 17B, LIGHT CHAIN (protein) ENVELOPE GLYCOPROTEIN GP120 (protein) T-CELL SURFACE GLYCOPROTEIN CD4 (protein)
Unique Ligands	IPA, NAG
Unique branched monosaccharides	FUC, NAG

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1SS4 \| pdb_00001ss4	Download File View File

Crystal Structure of the Glyoxalase Family Protein APC24694 from Bacillus cereus

Kim, Y., Li, H., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2004-08-03
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Bacillus cereus
Macromolecule	Glyoxalase family protein (protein)
Unique Ligands	ACT, CIT, FMT, GSH, MG, NA

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1TC5 \| pdb_00001tc5	Download File View File

Structural Analysis of a probable eukaryotic D-amino acid tRNA deacylase

Robien, M.A., Hol, W.G.J., Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

To be published

Released	2004-06-08
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Leishmania major
Macromolecule	Probable eukaryotic D-amino acid tRNA deacylase, LMAJ005534AAA (protein)

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1TQG \| pdb_00001tqg	Download File View File

CheA phosphotransferase domain from Thermotoga maritima

Quezada, C.M., Gradinaru, C., Simon, M.I., Bilwes, A.M., Crane, B.R.

(2004) J Mol Biology 341: 1283-1294

Released	2004-09-07
Method	X-RAY DIFFRACTION 0.98 Å
Organisms	Thermotoga maritima
Macromolecule	Chemotaxis protein cheA (protein)

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1V0E \| pdb_00001v0e	Download File View File

Endosialidase of Bacteriophage K1F

Stummeyer, K., Dickmanns, A., Muehlenhoff, M., Gerady-Schahn, R., Ficner, R.

(2005) Nat Struct Mol Biol 12: 90

Released	2004-12-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia phage K1F
Macromolecule	ENDO-ALPHA-SIALIDASE (protein)
Unique Ligands	PO4

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1V0F \| pdb_00001v0f	Download File View File

Endosialidase of Bacteriophage K1F in complex with oligomeric alpha-2,8-sialic acid

Stummeyer, K., Dickmanns, A., Muehlenhoff, M., Gerady-Schahn, R., Ficner, R.

(2005) Nat Struct Mol Biol 12: 90

Released	2004-12-13
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Escherichia phage K1F
Macromolecule	ENDO-ALPHA-SIALIDASE (protein)
Unique Ligands	PO4, SLB
Unique branched monosaccharides	SIA

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1WPW \| pdb_00001wpw	Download File View File

Crystal Structure of IPMDH from Sulfolobus tokodaii

Hirose, R., Sakurai, M., Suzuki, T., Moriyama, H., Sato, T., Yamagishi, A., Oshima, T., Tanaka, N.

To be published

Released	2004-10-05
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Sulfurisphaera tokodaii
Macromolecule	3-isopropylmalate dehydrogenase (protein)
Unique Ligands	MG

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1WSE \| pdb_00001wse	Download File View File

Co-crystal structure of E.coli RNase HI active site mutant (E48A*) with Mn2+

Tsunaka, Y., Takano, K., Matsumura, H., Yamagata, Y., Kanaya, S.

(2005) J Mol Biology 345: 1171-1183

Released	2005-02-08
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	Ribonuclease HI (protein)
Unique Ligands	MN

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1YUN \| pdb_00001yun	Download File View File

Crystal Structure of Nicotinic Acid Mononucleotide Adenylyltransferase from Pseudomonas aeruginosa

Yoon, H.J., Kim, H.L., Mikami, B., Suh, S.W.

(2005) J Mol Biology 351: 258-265

Released	2005-11-08
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	Probable nicotinate-nucleotide adenylyltransferase (protein)
Unique Ligands	ATP, MG

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1ZIV \| pdb_00001ziv	Download File View File

Catalytic Domain of Human Calpain-9

Walker, J.R., Davis, T., Newman, E.M., Mackenzie, F., Dong, A., Choe, J., Arrowsmith, C., Sundstrom, M., Edwards, A., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

(2007) J Mol Biology 366: 216-229

Released	2005-07-05
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Homo sapiens
Macromolecule	Calpain 9 (protein)
Unique Ligands	BME, CA

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1ZVM \| pdb_00001zvm	Download File View File

Crystal structure of human CD38: cyclic-ADP-ribosyl synthetase/NAD+ glycohydrolase

Shi, W., Yang, T., Almo, S.C., Schramm, V.L., Sauve, A.

To be published

Released	2006-06-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	ADP-ribosyl cyclase 1 (protein)
Unique Ligands	SO4

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2BBZ \| pdb_00002bbz	Download File View File

Crystal Structure of MC159 Reveals Molecular Mechanism of DISC Assembly and vFLIP Inhibition

Yang, J.K., Wang, L., Zheng, L., Wan, F., Ahmed, M., Lenardo, M.J., Wu, H.

(2005) Mol Cell 20: 939-949

Released	2006-02-14
Method	X-RAY DIFFRACTION 3.8 Å
Organisms	Molluscum contagiosum virus subtype 1
Macromolecule	Viral CASP8 and FADD-like apoptosis regulator (protein)

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2FIY \| pdb_00002fiy	Download File View File

The crystal structure of the FdhE protein from Pseudomonas aeruginosa

Zhang, R., Evdokimova, E., Savchenko, A., Edwards, A., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2006-02-14
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Protein fdhE homolog (protein)
Unique Ligands	FE

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2G38 \| pdb_00002g38	Download File View File

A PE/PPE Protein Complex from Mycobacterium tuberculosis

Strong, M., Sawaya, M.R., Eisenberg, D., TB Structural Genomics Consortium (TBSGC)

(2006) Proc Natl Acad Sci U S A 103: 8060-8065

Released	2006-03-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	PE FAMILY PROTEIN (protein) PPE FAMILY PROTEIN (protein)
Unique Ligands	MN

1 to 25 of 226 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1CI6 | pdb_00001ci6

1EF1 | pdb_00001ef1

1G9M | pdb_00001g9m

1GC1 | pdb_00001gc1

1IIC | pdb_00001iic

1KJY | pdb_00001kjy

1KL9 | pdb_00001kl9

1KTJ | pdb_00001ktj

1LYN | pdb_00001lyn

1N7U | pdb_00001n7u

1OJL | pdb_00001ojl

1RZJ | pdb_00001rzj

1SS4 | pdb_00001ss4

1TC5 | pdb_00001tc5

1TQG | pdb_00001tqg

1V0E | pdb_00001v0e

1V0F | pdb_00001v0f

1WPW | pdb_00001wpw

1WSE | pdb_00001wse

1YUN | pdb_00001yun

1ZIV | pdb_00001ziv

1ZVM | pdb_00001zvm

2BBZ | pdb_00002bbz

2FIY | pdb_00002fiy

2G38 | pdb_00002g38