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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Jedrzejas, M.J."

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Search Summary

This query matches 47 Structures.

Refinements

Structure Determination Methodology

experimental (47)

Scientific Name of Source Organism

	synthetic construct (11)
	Influenza A virus (10)
	Homo sapiens (6)
	Thogotovirus thogotoense (5)
	Human adenovirus 2 (3)
	Influenza B virus (STRAIN B/BEIJING/1/87) (3)
	Actinomycetes (2)
	Human adenovirus 5 (2)
	Measles morbillivirus (2)
	Pyrococcus horikoshii OT3 (2)

More...

Taxonomy

	Riboviria (31)
	other sequences (11)
	Eukaryota (8)
	Varidnaviria (5)
	Archaea (3)
	Bacteria (3)
	Duplodnaviria (1)

Experimental Method

	X-RAY DIFFRACTION (32)
	ELECTRON MICROSCOPY (14)
	SOLUTION NMR (1)

Polymer Entity Type

	Protein (47)
	RNA (12)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (9)
	2.0 - 2.5 (12)
	2.5 - 3.0 (5)
	3.0 - 3.5 (11)
	3.5 - 4.0 (1)
	4.0 - 4.5 (2)
	> 4.5 (5)

Release Date

	1990 - 1994 (3)
	1995 - 1999 (2)
	2000 - 2004 (3)
	2005 - 2009 (8)
	2010 - 2014 (11)
	2015 - 2019 (6)
	2020 - 2024 (8)
	2025 - 2029 (6)

Enzyme Classification Name

	Hydrolases (8)
	Transferases (2)

Symmetry Type

	Asymmetric (21)
	Cyclic (12)
	Helical (6)
	Icosahedral (3)
	Tetrahedral (3)
	Dihedral (1)

SCOP Classification

	All alpha proteins (2)
	All beta proteins (6)
	Alpha and beta proteins (a+b) (3)
	Alpha and beta proteins (a/b) (2)
	Artifacts (1)
	Coiled coil proteins (1)

AllSelected

1 to 25 of 47 Structures

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1HTM \| pdb_00001htm	Download File View File

STRUCTURE OF INFLUENZA HAEMAGGLUTININ AT THE PH OF MEMBRANE FUSION

Bullough, P.A., Hughson, F.M., Skehel, J.J., Wiley, D.C.

(1994) Nature 371: 37-43

Released	1995-02-14
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	uncultured beta proteobacterium UMTRA-608
Macromolecule	HEMAGGLUTININ HA1 CHAIN (protein) HEMAGGLUTININ HA2 CHAIN (protein)

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1KNB \| pdb_00001knb	Download File View File

CRYSTAL STRUCTURE OF THE RECEPTOR-BINDING DOMAIN OF ADENOVIRUS TYPE 5 FIBER PROTEIN AT 1.7 ANGSTROMS RESOLUTION

Xia, D., Henry, L.J., Gerard, R.D., Deisenhofer, J.

(1994) Structure 2: 1259-1270

Released	1995-03-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Human adenovirus 5
Macromolecule	ADENOVIRUS TYPE 5 FIBER PROTEIN (protein)

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1NSB \| pdb_00001nsb	Download File View File

THE 2.2 ANGSTROMS RESOLUTION CRYSTAL STRUCTURE OF INFLUENZA B NEURAMINIDASE AND ITS COMPLEX WITH SIALIC ACID

Burmeister, W.P., Ruigrok, R.W.H., Cusack, S.

(1992) EMBO J 11: 49-56

Released	1993-10-31
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Influenza B virus (STRAIN B/BEIJING/1/87)
Macromolecule	NEURAMINIDASE (protein)
Unique Ligands	CA, NAG

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1NSC \| pdb_00001nsc	Download File View File

INFLUENZA B VIRUS NEURAMINIDASE CAN SYNTHESIZE ITS OWN INHIBITOR

Burmeister, W.P., Ruigrok, R.W.H., Cusack, S.

(1993) Structure 1: 19-26

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Influenza B virus (STRAIN B/BEIJING/1/87)
Macromolecule	NEURAMINIDASE (protein)
Unique Ligands	CA, NAG, SIA

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1NSD \| pdb_00001nsd	Download File View File

INFLUENZA B VIRUS NEURAMINIDASE CAN SYNTHESIZE ITS OWN INHIBITOR

Burmeister, W.P., Ruigrok, R.W.H., Cusack, S.

(1993) Structure 1: 19-26

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Influenza B virus (STRAIN B/BEIJING/1/87)
Macromolecule	NEURAMINIDASE (protein)
Unique Ligands	CA, DAN, NAG

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1O6E \| pdb_00001o6e	Download File View File

Epstein-Barr virus protease

Buisson, M., Hernandez, J., Lascoux, D., Schoehn, G., Forest, E., Arlaud, G., Seigneurin, J., Ruigrok, R.W.H., Burmeister, W.P.

(2002) J Mol Biology 324: 89

Released	2002-11-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	human gammaherpesvirus 4
Macromolecule	CAPSID PROTEIN P40 (protein)
Unique Ligands	ISP

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1T3E \| pdb_00001t3e	Download File View File

Structural basis of dynamic glycine receptor clustering

Sola, M., Bavro, V.N., Timmins, J., Franz, T., Ricard-Blum, S., Schoehn, G., Ruigrok, R.W.H., Paarmann, I., Saiyed, T., O'Sullivan, G.A.

(2004) EMBO J 23: 2510-2519

Released	2004-07-27
Method	X-RAY DIFFRACTION 3.25 Å
Organisms	Rattus norvegicus
Macromolecule	49-mer fragment of Glycine receptor beta chain (protein) Gephyrin (protein)
Unique Ligands	SO4

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1VYI \| pdb_00001vyi	Download File View File

Structure of the c-terminal domain of the polymerase cofactor of rabies virus: insights in function and evolution.

Mavrakis, M., McCarthy, A.A., Roche, S., Blondel, D., Ruigrok, R.W.H.

(2004) J Mol Biology 343: 819

Released	2004-10-15
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Rabies virus CVS-11
Macromolecule	RNA POLYMERASE ALPHA SUBUNIT (protein)
Unique Ligands	GOL

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2C9F \| pdb_00002c9f	Download File View File

THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON DODECAHEDRON

Fuschiotti, P., Schoehn, G., Fender, P., Fabry, C.M.S., Hewat, E.A., Chroboczek, J., Ruigrok, R.W.H., Conway, J.F.

(2006) J Mol Biology 356: 510

Released	2006-03-02
Method	ELECTRON MICROSCOPY 16.5 Å
Organisms	Human adenovirus 2
Macromolecule	FIBER (protein) PENTON PROTEIN (protein)

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2C9G \| pdb_00002c9g	Download File View File

THE QUASI-ATOMIC MODEL OF THE ADENOVIRUS TYPE 3 PENTON BASE DODECAHEDRON

Fuschiotti, P., Schoehn, G., Fender, P., Fabry, C.M.S., Hewat, E.A., Chroboczek, J., Ruigrok, R.W.H., Conway, J.F.

(2006) J Mol Biology 356: 510

Released	2006-01-04
Method	ELECTRON MICROSCOPY 9.3 Å
Organisms	Human adenovirus 2
Macromolecule	PENTON PROTEIN (protein)

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2CF4 \| pdb_00002cf4	Download File View File

Pyrococcus horikoshii TET1 peptidase can assemble into a tetrahedron or a large octahedral shell

Vellieux, F.M.D., Schoehn, G., Dura, M.A., Roussel, A., Franzetti, B.

(2006) J Biological Chem 281: 36327

Released	2006-09-14
Method	X-RAY DIFFRACTION 3.08 Å
Organisms	Pyrococcus horikoshii OT3
Macromolecule	PROTEIN PH0519 (protein)
Unique Ligands	CO

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2GTT \| pdb_00002gtt	Download File View File

Crystal structure of the rabies virus nucleoprotein-RNA complex

Albertini, A.A.V., Wernimont, A.K., Muziol, T., Ravelli, R.B.G., Weissenhorn, W., Ruigrok, R.W.H.

(2006) Science 313: 360-363

Released	2006-09-19
Method	X-RAY DIFFRACTION 3.49 Å
Organisms	Lyssavirus rabies synthetic construct
Macromolecule	Nucleoprotein (protein) RNA (99-MER) (nucleic acid)
Unique Ligands	PO4

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2JDQ \| pdb_00002jdq	Download File View File

C-terminal domain of influenza A virus polymerase PB2 subunit in complex with human importin alpha5

Tarendeau, F., Guilligay, D., Mas, P., Boulo, S., Baudin, F., Ruigrok, R.W.H., Hart, D.J., Cusack, S.

(2007) Nat Struct Mol Biol 14: 229

Released	2007-02-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens Influenza A virus
Macromolecule	IMPORTIN ALPHA-1 SUBUNIT (protein) POLYMERASE BASIC PROTEIN 2 (protein)

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2VQZ \| pdb_00002vqz	Download File View File

Structure of the cap-binding domain of influenza virus polymerase subunit PB2 with bound m7GTP

Guilligay, D., Tarendeau, F., Resa-Infante, P., Coloma, R., Crepin, T., Sehr, P., Lewis, J., Ruigrok, R.W.H., Ortin, J., Hart, D.J., Cusack, S.

(2008) Nat Struct Mol Biol 15: 500

Released	2008-05-13
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Influenza A virus
Macromolecule	POLYMERASE BASIC PROTEIN 2 (protein)
Unique Ligands	MGT

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2VTW \| pdb_00002vtw	Download File View File

Structure of the C-terminal head domain of the fowl adenovirus type 1 short fibre

ElBakkouri, M., Seiradake, E., Cusack, S., Ruigrok, R.W.H., Schoehn, G.

(2008) Virology 378: 169

Released	2008-06-17
Method	X-RAY DIFFRACTION 2 Å
Organisms	Fowl aviadenovirus 1
Macromolecule	FIBER PROTEIN 2 (protein)
Unique Ligands	GOL, SO4

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2W69 \| pdb_00002w69	Download File View File

Influenza polymerase fragment

Dias, A., Bouvier, D., Crepin, T., McCarthy, A.A., Hart, D.J., Baudin, F., Cusack, S., Ruigrok, R.W.H.

(2009) Nature 458: 914

Released	2009-02-03
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Influenza A virus
Macromolecule	POLYMERASE ACIDIC PROTEIN (protein)
Unique Ligands	MN, SO4

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2WYR \| pdb_00002wyr	Download File View File

3-D structure of PhTET1-12s, dodecamer in the asymmetric unit

Vellieux, F.M.D., Dura, M.A., Franzetti, B.

To be published

Released	2010-12-01
Method	X-RAY DIFFRACTION 2.245 Å
Organisms	Pyrococcus horikoshii OT3
Macromolecule	COBALT-ACTIVATED PEPTIDASE TET1 (protein)
Unique Ligands	CO

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2WZN \| pdb_00002wzn	Download File View File

3d structure of TET3 from Pyrococcus horikoshii

Rosenbaum, E., Dura, M.A., Vellieux, F.M., Franzetti, B.

(2009) Mol Microbiol 72: 26

Released	2010-11-03
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Pyrococcus horikoshii
Macromolecule	354AA LONG HYPOTHETICAL OPERON PROTEIN FRV (protein)
Unique Ligands	CL, GOL, ZN