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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Gatreddi, S."

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Search Summary

This query matches 15 Structures.

Refinements

Structure Determination Methodology

experimental (15)

Scientific Name of Source Organism

	Leishmania donovani BPK282A1 (7)
	Isosphaera pallida (3)
	Lactiplantibacillus plantarum WCFS1 (3)
	Leishmania donovani (1)
	Thermoanaerobacterium thermosaccharolyticum DSM 571 (1)

Taxonomy

	Eukaryota (8)
	Bacteria (7)

Experimental Method

X-RAY DIFFRACTION (15)

Polymer Entity Type

Protein (15)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (10)
	2.0 - 2.5 (4)

Release Date

	2015 - 2019 (4)
	2020 - 2024 (8)
	2025 - 2029 (3)

Enzyme Classification Name

	Transferases (8)
	Isomerases (3)

Symmetry Type

	Asymmetric (7)
	Cyclic (8)

SCOP Classification

Alpha and beta proteins (a/b) (8)

AllSelected

1 to 15 of 15 Structures

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5ZWY \| pdb_00005zwy	Download File View File

Ribokinase from Leishmania donovani

Gatreddi, S., Vasudevan, D., Qureshi, I.A.

(2019) Int J Biol Macromol 136: 253-265

Released	2019-05-22
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Leishmania donovani BPK282A1
Macromolecule	Ribokinase (protein)
Unique Ligands	CL, GOL, NA

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6A8A \| pdb_00006a8a	Download File View File

Ribokinase from Leishmania donovani with ATP

Gatreddi, S., Qureshi, I.A.

(2019) Int J Biol Macromol 136: 253-265

Released	2019-07-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Leishmania donovani BPK282A1
Macromolecule	Ribokinase (protein)
Unique Ligands	ATP, CL, GOL, NA

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6A8B \| pdb_00006a8b	Download File View File

Ribokinase from Leishmania donovani with AMPPCP

Gatreddi, S., Pillalamarri, V., Qureshi, I.A.

(2019) Int J Biol Macromol 136: 253-265

Released	2019-07-10
Method	X-RAY DIFFRACTION 2.01 Å
Organisms	Leishmania donovani BPK282A1
Macromolecule	Ribokinase (protein)
Unique Ligands	ACP, CL, GOL, NA

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6A8C \| pdb_00006a8c	Download File View File

Ribokinase from Leishmania donovani with ADP

Gatreddi, S., Vasudevan, D., Qureshi, I.A.

(2019) Int J Biol Macromol 136: 253-265

Released	2019-07-10
Method	X-RAY DIFFRACTION 1.98 Å
Organisms	Leishmania donovani BPK282A1
Macromolecule	Ribokinase (protein)
Unique Ligands	ADP, CL, GOL, NA

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6K8Z \| pdb_00006k8z	Download File View File

Pyridoxal Kinase from Leishmania donovani in complex with ADP

Are, S., Gatreddi, S., Qureshi, I.A.

(2020) Int J Biol Macromol 152: 812-827

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Leishmania donovani
Macromolecule	Pyridoxal kinase, putative (protein)
Unique Ligands	ACT, ADP, CA, CL

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6K90 \| pdb_00006k90	Download File View File

Pyridoxal Kinase from Leishmania donovani in complex with ADP and Pyridoxamine

Are, S., Gatreddi, S., Qureshi, I.A.

(2020) Int J Biol Macromol 152: 812-827

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Leishmania donovani BPK282A1
Macromolecule	Pyridoxal kinase, putative (protein)
Unique Ligands	ADP, CA, CL, PO4, PXM

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6K91 \| pdb_00006k91	Download File View File

Pyridoxal Kinase from Leishmania donovani in complex with ADP and Pyridoxine

Are, S., Gatreddi, S., Qureshi, I.A.

(2020) Int J Biol Macromol 152: 812-827

Released	2020-03-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Leishmania donovani BPK282A1
Macromolecule	Pyridoxal kinase, putative (protein)
Unique Ligands	ADP, CA, CL, PO4, UEG

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6K92 \| pdb_00006k92	Download File View File

Pyridoxal Kinase from Leishmania donovani in complex with ADP and Ginkgotoxin

Are, S., Gatreddi, S., Qureshi, I.A.

(2020) Int J Biol Macromol 152: 812-827

Released	2020-03-25
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Leishmania donovani BPK282A1
Macromolecule	Pyridoxal kinase, putative (protein)
Unique Ligands	ADP, CA, CL, GT0, PO4

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7S91 \| pdb_00007s91	Download File View File

Structure of the malate racemase mar2 apoprotein from Thermoanaerobacterium thermosaccharolyticum at 2.25 angstroms resolution

Gatreddi, S., Hausinger, R.P., Hu, J.

(2023) Biometals 36: 303-313

Released	2021-10-13
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Thermoanaerobacterium thermosaccharolyticum DSM 571
Macromolecule	Malate racemase Mar2 (protein)
Unique Ligands	CL

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8EZF \| pdb_00008ezf	Download File View File

A tethered niacin-derived pincer complex with a nickel-carbon or sulfite-carbon bond in lactate racemase R98A/R100A variant

Gatreddi, S., Hausinger, R.P., Hu, J.

(2023) ACS Catal 13: 1441-1448

Released	2023-01-25
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Lactiplantibacillus plantarum WCFS1
Macromolecule	Lactate racemase (protein)
Unique Ligands	CA, CL, EDO, ENJ, MG, NI

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8EZH \| pdb_00008ezh	Download File View File

A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase R98A/R100A variant modeled with sulfite-NPN adduct

Gatreddi, S., Hausinger, R.P., Hu, J.

(2023) ACS Catal 13: 1441-1448

Released	2023-01-25
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Lactiplantibacillus plantarum WCFS1
Macromolecule	Lactate racemase (protein)
Unique Ligands	CA, CL, EDO, ENJ, MG, NI

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8EZI \| pdb_00008ezi	Download File View File

A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase R98A/R100A variant modeled with separated sulfite and NPN

Gatreddi, S., Hausinger, R.P., Hu, J.

(2023) ACS Catal 13: 1441-1448

Released	2023-01-25
Method	X-RAY DIFFRACTION 1.99 Å
Organisms	Lactiplantibacillus plantarum WCFS1
Macromolecule	Lactate racemase (protein)
Unique Ligands	4EY, CA, CL, EDO, MG, NI, SO3

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9EIA \| pdb_00009eia	Download File View File

A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with copurified D-lactate

Gatreddi, S., Hausinger, R.P., Hu, J.

(2024) bioRxiv

Released	2025-01-29
Method	X-RAY DIFFRACTION 1.74 Å
Organisms	Isosphaera pallida
Macromolecule	A broad-substrate spectrum lactate racemase A (protein)
Unique Ligands	4EY, EDO, LAC, NI, PEG

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9EID \| pdb_00009eid	Download File View File

A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with D-2-Hydroxybutyrate

Gatreddi, S., Hausinger, R.P., Hu, J.

(2024) bioRxiv

Released	2025-01-29
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Isosphaera pallida
Macromolecule	A broad-substrate spectrum lactate racemase A (protein)
Unique Ligands	4EY, NI, PO4, UCU

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9EIF \| pdb_00009eif	Download File View File

A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with D-2-Hydroxyisovalerate

Gatreddi, S., Hausinger, R.P., Hu, J.

(2024) bioRxiv

Released	2025-01-29
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Isosphaera pallida
Macromolecule	A broad-substrate spectrum lactate racemase A (protein)
Unique Ligands	4EY, NI, PEG, PGE, VAD

1 to 15 of 15 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

5ZWY | pdb_00005zwy

Ribokinase from Leishmania donovani

6A8A | pdb_00006a8a

Ribokinase from Leishmania donovani with ATP

6A8B | pdb_00006a8b

Ribokinase from Leishmania donovani with AMPPCP

6A8C | pdb_00006a8c

Ribokinase from Leishmania donovani with ADP

6K8Z | pdb_00006k8z

Pyridoxal Kinase from Leishmania donovani in complex with ADP

6K90 | pdb_00006k90

Pyridoxal Kinase from Leishmania donovani in complex with ADP and Pyridoxamine

6K91 | pdb_00006k91

Pyridoxal Kinase from Leishmania donovani in complex with ADP and Pyridoxine

6K92 | pdb_00006k92

Pyridoxal Kinase from Leishmania donovani in complex with ADP and Ginkgotoxin

7S91 | pdb_00007s91

Structure of the malate racemase mar2 apoprotein from Thermoanaerobacterium thermosaccharolyticum at 2.25 angstroms resolution

8EZF | pdb_00008ezf

A tethered niacin-derived pincer complex with a nickel-carbon or sulfite-carbon bond in lactate racemase R98A/R100A variant

8EZH | pdb_00008ezh

A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase R98A/R100A variant modeled with sulfite-NPN adduct

8EZI | pdb_00008ezi

A tethered niacin-derived pincer complex with a nickel-carbon bond in lactate racemase R98A/R100A variant modeled with separated sulfite and NPN

9EIA | pdb_00009eia

A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with copurified D-lactate

9EID | pdb_00009eid

A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with D-2-Hydroxybutyrate

9EIF | pdb_00009eif

A broad-substrate spectrum lactate racemase A from Isosphaera pallida in complex with D-2-Hydroxyisovalerate

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

5ZWY | pdb_00005zwy

6A8A | pdb_00006a8a

6A8B | pdb_00006a8b

6A8C | pdb_00006a8c

6K8Z | pdb_00006k8z

6K90 | pdb_00006k90

6K91 | pdb_00006k91

6K92 | pdb_00006k92

7S91 | pdb_00007s91

8EZF | pdb_00008ezf

8EZH | pdb_00008ezh

8EZI | pdb_00008ezi

9EIA | pdb_00009eia

9EID | pdb_00009eid

9EIF | pdb_00009eif