RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "de Kruijff, B."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 5 Structures.

Refinements

Structure Determination Methodology

experimental (5)

Scientific Name of Source Organism

	Bacillus sp. HIL-Y85/54728 (3)
	Escherichia coli (1)
	Lactococcus lactis (1)
	Monarthropalpus flavus (1)

Taxonomy

	Bacteria (5)
	Eukaryota (1)

Experimental Method

	SOLUTION NMR (4)
	X-RAY DIFFRACTION (1)

Polymer Entity Type

Protein (5)

Refinement Resolution (Å)

2.0 - 2.5 (1)

Release Date

	2000 - 2004 (4)
	2005 - 2009 (1)

Symmetry Type

	Asymmetric (4)
	Dihedral (1)

SCOP Classification

	Alpha and beta proteins (a+b) (1)
	Peptides (4)

AllSelected

1 to 5 of 5 Structures

Page 1 of 1

Sort by

Explore in 3D

1MQX \| pdb_00001mqx	Download File View File

NMR Solution Structure of Type-B Lantibiotics Mersacidin in MeOH/H2O Mixture

Hsu, S.-T., Breukink, E., Bierbaum, G., Sahl, H.-G., de Kruijff, B., Kaptein, R., van Nuland, N.A., Bonvin, A.M.

(2003) J Biological Chem 278: 13110

Released	2003-03-11
Method	SOLUTION NMR
Organisms	Bacillus sp. HIL-Y85/54728
Macromolecule	LANTIBIOTIC MERSACIDIN (protein)

Explore in 3D

1MQY \| pdb_00001mqy	Download File View File

NMR solution structure of type-B lantibiotics mersacidin in DPC micelles

Hsu, S.-T., Breukink, E., Bierbaum, G., Sahl, H.-G., de Kruijff, B., Kaptein, R., van Nuland, N.A., Bonvin, A.M.

(2003) J Biological Chem 278: 13110

Released	2003-03-11
Method	SOLUTION NMR
Organisms	Bacillus sp. HIL-Y85/54728
Macromolecule	LANTIBIOTIC MERSACIDIN (protein)

Explore in 3D

1MQZ \| pdb_00001mqz	Download File View File

NMR solution structure of type-B lantibiotics mersacidin bound to lipid II in DPC micelles

Hsu, S.-T., Breukink, E., Bierbaum, G., Sahl, H.-G., de Kruijff, B., Kaptein, R., van Nuland, N.A., Bonvin, A.M.

(2003) J Biological Chem 278: 13110

Released	2003-03-11
Method	SOLUTION NMR
Organisms	Bacillus sp. HIL-Y85/54728
Macromolecule	LANTIBIOTIC MERSACIDIN (protein)

Explore in 3D

1QYN \| pdb_00001qyn	Download File View File

Crystal Structure of SecB from Escherichia coli

Dekker, C., de Kruijff, B., Gros, P.

(2003) J Struct Biol 144: 313-319

Released	2003-12-09
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Escherichia coli
Macromolecule	Protein-export protein secB (protein)

Explore in 3D

1WCO \| pdb_00001wco	Download File View File

The solution structure of the nisin-lipid II complex

Hsu, S.-T.D., Breukink, E., Tischenko, E., Lutters, M.A.G., de Kruijff, B., Kaptein, R., Bonvin, A.M.J.J., van Nuland, N.A.J.

(2004) Nat Struct Mol Biol 11: 963-967

Released	2005-03-07
Method	SOLUTION NMR
Organisms	Lactococcus lactis Monarthropalpus flavus
Macromolecule	ALA-FGA-LYS-DAL-DAL PEPTIDE (protein) Lantibiotic (protein)
Unique Ligands	FDF
Unique branched monosaccharides	MUB, NAG

1 to 5 of 5 Structures

Page 1 of 1

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1MQX | pdb_00001mqx

NMR Solution Structure of Type-B Lantibiotics Mersacidin in MeOH/H2O Mixture

1MQY | pdb_00001mqy

NMR solution structure of type-B lantibiotics mersacidin in DPC micelles

1MQZ | pdb_00001mqz

NMR solution structure of type-B lantibiotics mersacidin bound to lipid II in DPC micelles

1QYN | pdb_00001qyn

Crystal Structure of SecB from Escherichia coli

1WCO | pdb_00001wco

The solution structure of the nisin-lipid II complex

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Symmetry Type

SCOP Classification

1MQX | pdb_00001mqx

NMR Solution Structure of Type-B Lantibiotics Mersacidin in MeOH/H2O Mixture

1MQY | pdb_00001mqy

NMR solution structure of type-B lantibiotics mersacidin in DPC micelles

1MQZ | pdb_00001mqz

NMR solution structure of type-B lantibiotics mersacidin bound to lipid II in DPC micelles

1QYN | pdb_00001qyn

Crystal Structure of SecB from Escherichia coli

1WCO | pdb_00001wco

The solution structure of the nisin-lipid II complex