RCSB PDB: Search

2GDQ \| pdb_00002gdq	Download File View File

Crystal structure of mandelate racemase/muconate lactonizing enzyme from Bacillus subtilis at 1.8 A resolution

Malashkevich, V.N., Toro, R., Sauder, J.M., Schwinn, K.D., Emtage, S., Thompson, D.A., Rutter, M.E., Dickey, M., Groshong, C., Bain, K.T., Adams, J.M., Reyes, C., Rooney, I., Powell, A., Boice, A., Gheyi, T., Ozyurt, S., Atwell, S., Wasserman, S.R., Burley, S.K., Sali, A., Babbitt, P., Pieper, U., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-04-04
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacillus subtilis subsp. subtilis str. 168
Macromolecule	yitF (protein)

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2HHL \| pdb_00002hhl	Download File View File

Crystal structure of the human small CTD phosphatase 3 isoform 1

Malashkevich, V.N., Toro, R., Ramagopal, U., Sauder, J.M., Schwinn, K.D., Thompson, D.A., Rutter, M.E., Dickey, M., Groshong, C., Bain, K.T., Adams, J.M., Reyes, C., Rooney, I., Powell, A., Boice, A., Gheyi, T., Ozyurt, S., Atwell, S., Wasserman, S.R., Emtage, S., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2007) J Struct Funct Genomics 8: 121-140

Released	2006-08-29
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	CTD small phosphatase-like protein (protein)
Unique Ligands	KEG

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2HJ1 \| pdb_00002hj1	Download File View File

Crystal structure of a 3D domain-swapped dimer of protein HI0395 from Haemophilus influenzae

Ramagopal, U.A., Patskovsky, Y.V., Toro, R., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-08-29
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Haemophilus influenzae 86-028NP
Macromolecule	Hypothetical protein (protein)
Unique Ligands	SO4

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2HZG \| pdb_00002hzg	Download File View File

Crystal structure of predicted Mandelate racemase from Rhodobacter sphaeroides

Ramagopal, U.A., Toro, R., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-08-29
Method	X-RAY DIFFRACTION 2.02 Å
Organisms	Cereibacter sphaeroides
Macromolecule	Mandelate racemase/muconate lactonizing enzyme/Enolase superfamily (protein)
Unique Ligands	GOL, NA

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2I52 \| pdb_00002i52	Download File View File

Crystal structure of protein PTO0218 from Picrophilus torridus, Pfam DUF372

Ramagopal, U.A., Gilmore, J., Toro, R., Bain, K.T., McKenzie, C., Reyes, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-09-12
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Picrophilus oshimae DSM 9789
Macromolecule	Hypothetical protein (protein)
Unique Ligands	CA, CL, GOL

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2IA1 \| pdb_00002ia1	Download File View File

Crystal structure of protein BH3703 from Bacillus halodurans, Pfam DUF600

Ramagopal, U.A., Russell, M., Toro, R., Freeman, J.C., Reyes, C., Gheyi, T., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-10-03
Method	X-RAY DIFFRACTION 1.59 Å
Organisms	Halalkalibacterium halodurans
Macromolecule	BH3703 protein (protein)
Unique Ligands	GOL, SO4

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2IJQ \| pdb_00002ijq	Download File View File

Crystal structure of protein rrnAC1037 from Haloarcula marismortui, Pfam DUF309

Malashkevich, V.N., Toro, R., Sauder, J.M., Schwinn, K.D., Thompson, D.A., Rutter, M.E., Dickey, M., Groshong, C., Bain, K.T., Adams, J.M., Reyes, C., Rooney, I., Powell, A., Boice, A., Gheyi, T., Ozyurt, S., Atwell, S., Wasserman, S.R., Emtage, S., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-10-24
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Haloarcula marismortui
Macromolecule	Hypothetical protein (protein)

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2IPQ \| pdb_00002ipq	Download File View File

Crystal structure of C-terminal domain of Salmonella Enterica protein STY4665, PFAM DUF1528

Ramagopal, U.A., Bonanno, J.B., Gilmore, J., Toro, R., Bain, K.T., Reyes, C., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-11-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhi
Macromolecule	Hypothetical protein STY4665 (protein)

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2NQL \| pdb_00002nql	Download File View File

Crystal structure of a member of the enolase superfamily from Agrobacterium tumefaciens

Patskovsky, Y., Ramagopal, U., Toro, R., Sauder, J.M., Dickey, M., Adams, J.M., Ozyurt, S., Wasserman, S.R., Gerlt, J., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-11-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Agrobacterium fabrum str. C58
Macromolecule	Isomerase/lactonizing enzyme (protein)
Unique Ligands	GOL, NA, SO4, UNL

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2NX2 \| pdb_00002nx2	Download File View File

Crystal structure of protein ypsA from Bacillus subtilis, Pfam DUF1273

Ramagopal, U.A., Alvarado, J., Dickey, M., Reyes, C., Toro, R., Bain, K., Gheyi, T., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-12-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Bacillus subtilis
Macromolecule	Hypothetical protein ypsA (protein)

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2O34 \| pdb_00002o34	Download File View File

Crystal structure of protein DVU1097 from Desulfovibrio vulgaris Hildenborough, Pfam DUF375

Malashkevich, V.N., Toro, R., Sauder, J.M., Schwinn, K.D., Thompson, D.A., Rutter, M.E., Dickey, M., Groshong, C., Bain, K.T., Adams, J.M., Reyes, C., Rooney, I., Powell, A., Boice, A., Gheyi, T., Ozyurt, S., Atwell, S., Wasserman, S.R., Emtage, S., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-12-12
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Nitratidesulfovibrio vulgaris
Macromolecule	Hypothetical protein (protein)
Unique Ligands	NA

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2O3J \| pdb_00002o3j	Download File View File

Structure of Caenorhabditis Elegans UDP-Glucose Dehydrogenase

Zhang, Y., Zhan, C., Patskovsky, Y., Ramagopal, U., Shi, W., Toro, R., Wengerter, B.C., Milst, S., Vidal, M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-12-12
Method	X-RAY DIFFRACTION 1.88 Å
Organisms	Caenorhabditis elegans
Macromolecule	UDP-glucose 6-dehydrogenase (protein)
Unique Ligands	GOL

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2O8R \| pdb_00002o8r	Download File View File

Crystal Structure of Polyphosphate Kinase from Porphyromonas Gingivalis

Patskovsky, Y., Toro, R., Sauder, J.M., Dickey, M., Adams, J.M., Ozyurt, S., Wasserman, S.R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Porphyromonas gingivalis
Macromolecule	Polyphosphate kinase (protein)
Unique Ligands	SO4

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2OGF \| pdb_00002ogf	Download File View File

Crystal structure of protein MJ0408 from Methanococcus jannaschii, Pfam DUF372

Ramagopal, U.A., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-01-16
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	Hypothetical protein MJ0408 (protein)
Unique Ligands	GOL, OXG, SO4

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2OKT \| pdb_00002okt	Download File View File

Crystal structure of O-succinylbenzoic acid synthetase from Staphylococcus aureus, ligand-free form

Patskovsky, Y., Toro, R., Malashkevich, V., Sauder, J.M., Ozyurt, S., Smith, D., Dickey, M., Maletic, M., Powell, A., Gheyi, T., Wasserman, S.R., Gerlt, J., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2014) Proc Natl Acad Sci U S A 111: 8535-8540

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Staphylococcus aureus subsp. aureus COL
Macromolecule	O-succinylbenzoic acid synthetase (protein)

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2OOG \| pdb_00002oog	Download File View File

Crystal structure of glycerophosphoryl diester phosphodiesterase from Staphylococcus aureus

Patskovsky, Y., Fedorov, E., Toro, R., Sauder, J.M., Smith, D., Freeman, J., Maletic, M., Powell, A., Gheyi, T., Wasserman, S.R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-02-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Staphylococcus aureus subsp. aureus N315
Macromolecule	Glycerophosphoryl diester phosphodiesterase (protein)
Unique Ligands	GOL, SO4, ZN

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2OQY \| pdb_00002oqy	Download File View File

The crystal structure of muconate cycloisomerase from Oceanobacillus iheyensis

Fedorov, A.A., Toro, R., Fedorov, E.V., Bonanno, J., Sauder, J.M., Burley, S.K., Gerlt, J.A., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2009) Biochemistry 48: 11546-11558

Released	2007-03-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Oceanobacillus iheyensis
Macromolecule	Muconate cycloisomerase (protein)
Unique Ligands	MG

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2OX4 \| pdb_00002ox4	Download File View File

Crystal structure of putative dehydratase from Zymomonas mobilis ZM4

Patskovsky, Y., Toro, R., Sauder, J.M., Freeman, J.C., Bain, K., Gheyi, T., Wasserman, S.R., Smith, D., Gerlt, J., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-03-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Zymomonas mobilis
Macromolecule	Putative mandelate racemase (protein)
Unique Ligands	CL, GOL, MG

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2OX7 \| pdb_00002ox7	Download File View File

Crystal structure of protein EF1440 from Enterococcus faecalis

Malashkevich, V.N., Toro, R., Sauder, J.M., Schwinn, K.D., Thompson, D.A., Bain, K.T., Adams, J.M., Reyes, C., Lau, C., Gilmore, J., Rooney, I., Gheyi, T., Wasserman, S.R., Emtage, S., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-03-06
Method	X-RAY DIFFRACTION 1.777 Å
Organisms	Enterococcus faecalis V583
Macromolecule	Hypothetical protein (protein)

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2OYC \| pdb_00002oyc	Download File View File

Crystal structure of human pyridoxal phosphate phosphatase

Ramagopal, U.A., Freeman, J., Izuka, M., Toro, R., Sauder, J.M., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

(2007) J Struct Funct Genomics 8: 121-140

Released	2007-03-13
Method	X-RAY DIFFRACTION 1.72 Å
Organisms	Homo sapiens
Macromolecule	Pyridoxal phosphate phosphatase (protein)
Unique Ligands	NA, WO4

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2OZ3 \| pdb_00002oz3	Download File View File

Crystal structure of L-Rhamnonate dehydratase from Azotobacter vinelandii

Patskovsky, Y., Toro, R., Sauder, J.M., Freeman, J.C., Bain, K., Gheyi, T., Wu, B., Wasserman, S.R., Smith, D., Gerlt, J., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2007-03-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Azotobacter vinelandii DJ
Macromolecule	Mandelate racemase/muconate lactonizing enzyme (protein)
Unique Ligands	GOL, NA