RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Tame, J.R.H."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 139 Structures.

Refinements

Structure Determination Methodology

experimental (139)

Scientific Name of Source Organism

	Salmonella enterica subsp. enterica serovar Typhimurium (26)
	synthetic construct (25)
	Escherichia coli (18)
	Homo sapiens (14)
	Thermus thermophilus (8)
	Geobacillus stearothermophilus (7)
	Escherichia coli K-12 (6)
	Haemophilus influenzae (5)
	Equus caballus (4)
	Rattus norvegicus (4)

More...

Taxonomy

	Bacteria (72)
	Eukaryota (35)
	other sequences (25)
	Riboviria (4)

Experimental Method

	X-RAY DIFFRACTION (132)
	ELECTRON MICROSCOPY (7)

Polymer Entity Type

Protein (139)

Refinement Resolution (Å)

	1.0 - 1.5 (19)
	1.5 - 2.0 (81)
	2.0 - 2.5 (32)
	2.5 - 3.0 (3)
	3.0 - 3.5 (4)

Release Date

	1995 - 1999 (26)
	2000 - 2004 (23)
	2005 - 2009 (26)
	2010 - 2014 (15)
	2015 - 2019 (20)
	2020 - 2024 (29)

Enzyme Classification Name

	Hydrolases (23)
	Lyases (11)
	Isomerases (4)
	Oxidoreductases (1)
	Transferases (2)

Membrane Protein Annotation

	PDBTM (4)
	MemProtMD (3)
	mpstruc (3)
	OPM (2)

Symmetry Type

	Asymmetric (75)
	Cyclic (59)
	Dihedral (5)
	Octahedral (3)

SCOP Classification

	All alpha proteins (15)
	Alpha and beta proteins (a+b) (13)
	Alpha and beta proteins (a/b) (34)
	All beta proteins (6)
	Multi-domain proteins (alpha and beta) (12)
	Artifacts (5)
	Membrane and cell surface proteins and peptides (2)
	Peptides (1)

AllSelected

1 to 25 of 139 Structures

Page 1 of 6

Sort by

Explore in 3D

1B05 \| pdb_00001b05	Download File View File

Structure of oligo-peptide binding protein complexed with LYS-CYS-LYS

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1998-11-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PEPTIDE LYS-CYS-LYS (protein) PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN (protein)
Unique Ligands	U1

Explore in 3D

1B0H \| pdb_00001b0h	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NAPTHYLALANYL-LYSINE

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	LYS-ALN-LYS PEPTIDE (protein) PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN (protein)
Unique Ligands	U1

Explore in 3D

1B1H \| pdb_00001b1h	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN/TRIPEPTIDE (LYS HPE LYS) COMPLEX

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS HPE LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B2H \| pdb_00001b2h	Download File View File

Oligo-Peptide Binding Protein Complexed with Lysyl-Ornithyl-Lysine

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	LYS-ORN-LYS (protein) PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN (protein)
Unique Ligands	ACT, U1

Explore in 3D

1B32 \| pdb_00001b32	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KMK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1998-12-23
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-MET-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	ACT, IUM

Explore in 3D

1B3F \| pdb_00001b3f	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KHK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1998-12-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-HIS-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B3G \| pdb_00001b3g	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KIK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1998-12-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-ILE-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B3H \| pdb_00001b3h	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-CYCLOHEXYLALANYL-LYSINE

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	LYS-ALC-LYS PEPTIDE (protein) PERIPLASMIC OLIGOPEPTIDE-BINDING PROTEIN (protein)
Unique Ligands	U1

Explore in 3D

1B3L \| pdb_00001b3l	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KGK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1998-12-16
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-GLY-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B40 \| pdb_00001b40	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KFK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-13
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-PHE-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B46 \| pdb_00001b46	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KPK

Tame, J.R.H., Sleigh, S.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-PRO-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	ACT, IUM

Explore in 3D

1B4H \| pdb_00001b4h	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-DIAMINOBUTYRIC ACID-LYSINE

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	LYS-DAB-LYS PEPTIDE (protein) PERIPLASMIC OLIGO-PEPTIDE BINDING PROTEIN (protein)
Unique Ligands	U1

Explore in 3D

1B4Z \| pdb_00001b4z	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KDK

Tame, J.R.H., Sleigh, S.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein) PROTEIN (PEPTIDE LYS-ASP-LYS) (protein)
Unique Ligands	ACT, IUM

Explore in 3D

1B51 \| pdb_00001b51	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KSK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-SER-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B52 \| pdb_00001b52	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KTK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-20
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-THR-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B58 \| pdb_00001b58	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KYK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-20
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-TYR-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1B5H \| pdb_00001b5h	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-DIAMINOPROPANOIC ACID-LYSINE

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	LYS-DPP-LYS PEPTIDE (protein) OLIGO-PEPTIDE BINDING PROTEIN (protein)
Unique Ligands	U1

Explore in 3D

1B5I \| pdb_00001b5i	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KNK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-ASN-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	U1

Explore in 3D

1B5J \| pdb_00001b5j	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KQK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-01-13
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	PROTEIN (LYS-GLN-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	U1

Explore in 3D

1B6H \| pdb_00001b6h	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORVALYL-LYSINE

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	LYS-NVA-LYS PEPTIDE (protein) Periplasmic oligopeptide-binding protein (protein)
Unique Ligands	U1

Explore in 3D

1B7H \| pdb_00001b7h	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN COMPLEXED WITH LYSYL-NORLEUCYL-LYSINE

Davies, T.G., Tame, J.R.H.

(1999) Protein Sci 8: 1432-1444

Released	1998-11-25
Method	X-RAY DIFFRACTION 2 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	LYS-NLE-LYS PEPTIDE (protein) Periplasmic oligopeptide-binding protein (protein)
Unique Ligands	U1

Explore in 3D

1B9J \| pdb_00001b9j	Download File View File

OLIGO-PEPTIDE BINDING PROTEIN (OPPA) COMPLEXED WITH KLK

Tame, J.R.H., Wilkinson, A.J.

(1999) J Mol Biology 291: 393-415

Released	1999-02-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium synthetic construct
Macromolecule	PROTEIN (LYS-LEU-LYS) (protein) PROTEIN (OLIGO-PEPTIDE BINDING PROTEIN) (protein)
Unique Ligands	IUM

Explore in 3D

1GCV \| pdb_00001gcv	Download File View File

DEOXY FORM HEMOGLOBIN FROM MUSTELUS GRISEUS

Naoi, Y., Chong, K.T., Yoshimatsu, K., Miyazaki, G., Tame, J.R.H., Park, S.Y., Adachi, S.I., Morimoto, H.

(2001) J Mol Biology 307: 259-270

Released	2000-08-31
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mustelus griseus
Macromolecule	HEMOGLOBIN (protein)
Unique Ligands	HEM

Explore in 3D

1GCW \| pdb_00001gcw	Download File View File

CO form hemoglobin from mustelus griseus

Naoi, Y., Chong, K.T., Yoshimatsu, K., Miyazaki, G., Tame, J.R.H., Park, S.Y., Adachi, S.I., Morimoto, H.

(2001) J Mol Biology 307: 259-270

Released	2000-09-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mustelus griseus
Macromolecule	PROTEIN (HEMOGLOBIN) (protein)
Unique Ligands	CMO, HEM

Explore in 3D

1GTT \| pdb_00001gtt	Download File View File

CRYSTAL STRUCTURE OF HPCE

Tame, J.R.H., Namba, K., Dodson, E.J., Roper, D.I.

(2002) Biochemistry 41: 2982

Released	2002-03-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	4-HYDROXYPHENYLACETATE DEGRADATION BIFUNCTIONAL ISOMERASE/DECARBOXYLASE (protein)
Unique Ligands	CA

1 to 25 of 139 Structures

Page 1 of 6

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1B05 | pdb_00001b05

1B0H | pdb_00001b0h

1B1H | pdb_00001b1h

1B2H | pdb_00001b2h

1B32 | pdb_00001b32

1B3F | pdb_00001b3f

1B3G | pdb_00001b3g

1B3H | pdb_00001b3h

1B3L | pdb_00001b3l

1B40 | pdb_00001b40

1B46 | pdb_00001b46

1B4H | pdb_00001b4h

1B4Z | pdb_00001b4z

1B51 | pdb_00001b51

1B52 | pdb_00001b52

1B58 | pdb_00001b58

1B5H | pdb_00001b5h

1B5I | pdb_00001b5i

1B5J | pdb_00001b5j

1B6H | pdb_00001b6h

1B7H | pdb_00001b7h

1B9J | pdb_00001b9j

1GCV | pdb_00001gcv

1GCW | pdb_00001gcw

1GTT | pdb_00001gtt