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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Schuller, M."

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Search Summary

This query matches 25 Structures.

Refinements

Structure Determination Methodology

experimental (25)

Scientific Name of Source Organism

	Homo sapiens (12)
	Mus musculus (7)
	Sus scrofa (3)
	Pseudomonas putida KT2440 (2)
	Measles virus strain Edmonston (1)
	Mycobacterium tuberculosis (1)
	Porcine respiratory coronavirus (1)
	Saccharomyces cerevisiae S288C (1)
	Severe acute respiratory syndrome coronavirus (1)
	TGEV virulent Purdue (1)

Taxonomy

	Eukaryota (22)
	Riboviria (4)
	Bacteria (3)

Experimental Method

	X-RAY DIFFRACTION (17)
	ELECTRON MICROSCOPY (8)

Polymer Entity Type

Protein (25)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (4)
	2.5 - 3.0 (5)
	3.0 - 3.5 (4)
	3.5 - 4.0 (2)
	4.0 - 4.5 (4)
	> 4.5 (2)

Release Date

	2005 - 2009 (6)
	2010 - 2014 (5)
	2015 - 2019 (7)
	2020 - 2024 (7)

Enzyme Classification Name

	Oxidoreductases (5)
	Hydrolases (4)
	Lyases (1)

Membrane Protein Annotation

OPM (4)

Symmetry Type

	Asymmetric (13)
	Cyclic (6)
	Dihedral (6)

SCOP Classification

	All beta proteins (10)
	All alpha proteins (3)
	Alpha and beta proteins (a+b) (3)
	Artifacts (4)
	Alpha and beta proteins (a/b) (1)
	Small proteins (1)

AllSelected

1 to 25 of 25 Structures

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2OR7 \| pdb_00002or7	Download File View File

Tim-2

Santiago, C., Ballesteros, A., Kaplan, G.G., Casasnovas, J.M.

(2007) Immunity 26: 299-310

Released	2007-04-03
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Mus musculus
Macromolecule	T-cell immunoglobulin and mucin domain-containing protein 2 (protein)
Unique Ligands	ACT

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2OR8 \| pdb_00002or8	Download File View File

Tim-1

Santiago, C., Ballesteros, A., Kaplan, G.G., Casasnovas, J.M.

(2007) Immunity 26: 299-310

Released	2007-04-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	Hepatitis A virus cellular receptor 1 homolog (protein)
Unique Ligands	ACT

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3BI9 \| pdb_00003bi9	Download File View File

Tim-4

Santiago, C., Ballesteros, A., Kaplan, G.G., Freeman, G.J., Casasnovas, J.M.

(2007) Immunity 27: 941-951

Released	2008-01-01
Method	X-RAY DIFFRACTION 2.95 Å
Organisms	Mus musculus
Macromolecule	T-cell immunoglobulin and mucin domain-containing protein 4 (protein)
Unique Ligands	ACT

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3BIA \| pdb_00003bia	Download File View File

Tim-4 in complex with sodium potassium tartrate

Santiago, C., Ballesteros, A., Kaplan, G.G., Freeman, G.J., Casasnovas, J.M.

(2007) Immunity 27: 941-951

Released	2008-01-01
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	T-cell immunoglobulin and mucin domain-containing protein 4 (protein)
Unique Ligands	NA, TLA

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3BIB \| pdb_00003bib	Download File View File

Tim-4 in complex with phosphatidylserine

Santiago, C., Ballesteros, A., Kaplan, G.G., Freeman, G.J., Casasnovas, J.M.

(2007) Immunity 27: 941-951

Released	2008-01-01
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	T-cell immunoglobulin and mucin domain-containing protein 4 (protein)
Unique Ligands	NA, PSF

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3INB \| pdb_00003inb	Download File View File

Structure of the measles virus hemagglutinin bound to the CD46 receptor

Santiago, C., Celma, M.L., Stehle, T., Casasnovas, J.M.

(2010) Nat Struct Mol Biol 17: 124-129

Released	2009-12-22
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens Measles virus strain Edmonston
Macromolecule	Hemagglutinin glycoprotein (protein) Membrane cofactor protein (protein)
Unique Ligands	NAG, SO4

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3KAA \| pdb_00003kaa	Download File View File

Structure of Tim-3 in complex with phosphatidylserine

Ballesteros, A., Santiago, C., Casasnovas, J.M.

(2010) J Immunol 184: 1918-1930

Released	2010-01-26
Method	X-RAY DIFFRACTION 3.002 Å
Organisms	Mus musculus
Macromolecule	Hepatitis A virus cellular receptor 2 (protein)
Unique Ligands	CA, PSF

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3O74 \| pdb_00003o74	Download File View File

Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida

Chavarria, M., Santiago, C., Platero, R., Krell, T., Casasnovas, J.M., de Lorenzo, V.

(2011) J Biological Chem 286: 9351-9359

Released	2011-01-12
Method	X-RAY DIFFRACTION 2 Å
Organisms	Pseudomonas putida KT2440
Macromolecule	Fructose transport system repressor FruR (protein)
Unique Ligands	GOL

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3O75 \| pdb_00003o75	Download File View File

Crystal structure of Cra transcriptional dual regulator from Pseudomonas putida in complex with fructose 1-phosphate'

Chavarria, M., Santiago, C., Platero, R., Krell, T., Casasnovas, J.M., de Lorenzo, V.

(2011) J Biological Chem 286: 9351-9359

Released	2011-01-12
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas putida KT2440
Macromolecule	Fructose transport system repressor FruR (protein)
Unique Ligands	F1X

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4F2M \| pdb_00004f2m	Download File View File

Crystal structure of a TGEV coronavirus Spike fragment in complex with the TGEV neutralizing monoclonal antibody 1AF10

Reguera, J., Santiago, C., Mudgal, G., Ordono, D., Enjuanes, L., Casasnovas, J.M.

(2012) PLoS Pathog 8: e1002859-e1002859

Released	2012-08-22
Method	X-RAY DIFFRACTION 3 Å
Organisms	Mus musculus TGEV virulent Purdue
Macromolecule	Spike protein (protein) monoclonal antibody 1AF10, heavy chain (protein) monoclonal antibody 1AF10, light chain (protein)
Unique Ligands	ACY, NAG
Unique branched monosaccharides	NAG

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4F5C \| pdb_00004f5c	Download File View File

Crystal structure of the spike receptor binding domain of a porcine respiratory coronavirus in complex with the pig aminopeptidase N ectodomain

Santiago, C., Reguera, J., Gaurav, M., Ordono, D., Enjuanes, L., Casasnovas, J.M.

(2012) PLoS Pathog 8: e1002859-e1002859

Released	2012-08-22
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Porcine respiratory coronavirus Sus scrofa
Macromolecule	Aminopeptidase N (protein) PRCV spike protein (protein)
Unique Ligands	NAG, ZN
Unique branched monosaccharides	NAG

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4V0S \| pdb_00004v0s	Download File View File

Crystal structure of Mycobacterium tuberculosis Type II Dehydroquinase D88N mutant inhibited by a 3-dehydroquinic acid derivative

Otero, J.M., Llamas-Saiz, A.L., Santiago, C., Lamb, H., Hawkins, A.R., Maneiro, M., Peon, A., Gonzalez-Bello, C., van Raaij, M.J.

To be published

Released	2016-01-13
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	3-DEHYDROQUINATE DEHYDRATASE (protein)
Unique Ligands	2HN, 7HN, CL, NA

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5IEH \| pdb_00005ieh	Download File View File

Structure of HLA-B*40:02 in complex with the phosphorylated endogenous peptide REF(p)SKEPEL

Alpizar, A., Marcilla, M., Santiago, C.

To be published

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Homo sapiens
Macromolecule	Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-40 alpha chain (protein) Inner centromere protein (protein)
Unique Ligands	EDO

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5IEK \| pdb_00005iek	Download File View File

Structure of HLA-B*40:02 in complex with the endogenous peptide REFSKEPEL

Alpizar, A., Marcilla, M., Santiago, C.

To be published

Released	2016-12-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	ARG-GLU-PHE-SER-LYS-GLU-PRO-GLU-LEU (protein) Beta-2-microglobulin (protein) HLA class I histocompatibility antigen, B-40 alpha chain (protein)

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5LDS \| pdb_00005lds	Download File View File

Structure of the porcine aminopeptidase N ectodomain

Santiago, C., Reguera, J., Mudgal, G., Casasnovas, J.M.

(2017) Sci Rep 7: 46045-46045

Released	2017-04-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Sus scrofa
Macromolecule	Aminopeptidase N (protein)
Unique Ligands	ACT, NAG, ZN
Unique branched monosaccharides	BMA, NAG

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5LG6 \| pdb_00005lg6	Download File View File

Structure of the deglycosylated porcine aminopeptidase N ectodomain

Santiago, C., Reguera, J., Mudgal, G., Casasnovas, J.M.

(2017) Sci Rep 7: 46045-46045

Released	2017-04-12
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Sus scrofa
Macromolecule	Aminopeptidase N (protein)
Unique Ligands	NAG, ZN

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5LHD \| pdb_00005lhd	Download File View File

Structure of glycosylated human aminopeptidase N

Recacha, R., Mudgal, G., Santiago, C., Casasnovas, J.M.

(2017) Sci Rep 7: 46045-46045

Released	2017-04-05
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Aminopeptidase N (protein)
Unique Ligands	EDO, NAG, ZN
Unique branched monosaccharides	BMA, NAG

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6QB8 \| pdb_00006qb8	Download File View File

Human CCT:mLST8 complex

Cuellar, J., Santiago, C., Ludlam, W.G., Bueno-Carrasco, M.T., Valpuesta, J.M., Willardson, B.M.

(2019) Nat Commun 10: 2865-2865

Released	2019-07-03
Method	ELECTRON MICROSCOPY 3.97 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 8
Unique Ligands	ADP

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6ZN2 \| pdb_00006zn2	Download File View File

Partial structure of tyrosine hydroxylase in complex with dopamine showing the catalytic domain and an alpha-helix from the regulatory domain involved in dopamine binding.

Bueno-Carrasco, M.T., Cuellar, J., Santiago, C., Valpuesta, J.M., Martinez, A., Flydal, M.I.

(2022) Nat Commun 13: 74-74

Released	2021-12-08
Method	ELECTRON MICROSCOPY 4.3 Å
Organisms	Homo sapiens
Macromolecule	SER-LEU-ILE-GLU-ASP-ALA-ARG-LYS-GLU-ARG-GLU-ALA-ALA-VAL-ALA-ALA-ALA-ALA (protein) Tyrosine 3-monooxygenase (protein)
Unique Ligands	FE, LDP

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6ZVP \| pdb_00006zvp	Download File View File

Atomic model of the EM-based structure of the full-length tyrosine hydroxylase in complex with dopamine (residues 40-497) in which the regulatory domain (residues 40-165) has been included only with the backbone atoms

Bueno-Carrasco, M.T., Cuellar, J., Santiago, C., Valpuesta, J.M., Martinez, A., Flydal, M.I.

(2022) Nat Commun 13: 74-74

Released	2021-11-17
Method	ELECTRON MICROSCOPY 4 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine 3-monooxygenase (protein)
Unique Ligands	FE, LDP

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6ZZU \| pdb_00006zzu	Download File View File

Partial structure of the substrate-free tyrosine hydroxylase (apo-TH).

Bueno-Carrasco, M.T., Cuellar, J., Santiago, C., Valpuesta, J.M., Martinez, A., Flydal, M.I.

(2022) Nat Commun 13: 74-74

Released	2021-11-17
Method	ELECTRON MICROSCOPY 3.5 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine 3-monooxygenase (protein)
Unique Ligands	FE

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7A2G \| pdb_00007a2g	Download File View File

Full-length structure of the substrate-free tyrosine hydroxylase (apo-TH).

Bueno-Carrasco, M.T., Cuellar, J., Santiago, C., Flydal, M.I., Martinez, A., Valpuesta, J.M.

(2022) Nat Commun 13: 74-74

Released	2021-12-01
Method	ELECTRON MICROSCOPY 4.1 Å
Organisms	Homo sapiens
Macromolecule	Tyrosine 3-monooxygenase (protein)
Unique Ligands	FE

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7PIM \| pdb_00007pim	Download File View File

Partial structure of tyrosine hydroxylase lacking the first 35 residues in complex with dopamine.

Bueno-Carrasco, M.T., Cuellar, J., Santiago, C., Valpuesta, J.M., Martinez, A., Flydal, M.I.

(2022) Nat Commun 13: 74-74

Released	2021-12-22
Method	ELECTRON MICROSCOPY 4.6 Å
Organisms	Homo sapiens
Macromolecule	Regulatory domain alpha-helix (protein) Tyrosine 3-monooxygenase (protein)
Unique Ligands	FE, LDP

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7ZHS \| pdb_00007zhs	Download File View File

3D reconstruction of the cylindrical assembly of DnaJA2 delta G/F by imposing D5 symmetry

Cuellar, J., Velasco-Carneros, L., Santiago, C., Martin-Benito, J., Valpuesta, J., Muga, A.

(2023) Nat Commun 14: 5436-5436

Released	2023-07-26
Method	ELECTRON MICROSCOPY 6.9 Å
Organisms	Homo sapiens Saccharomyces cerevisiae S288C
Macromolecule	Ubiquitin-like protein SMT3,DnaJ homolog subfamily A member 2 (protein)
Unique Ligands	ZN

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8C89 \| pdb_00008c89	Download File View File

SARS-CoV-2 spike in complex with the 17T2 neutralizing antibody Fab fragment (local refinement of RBD and Fab)

Modrego, A., Carlero, D., Bueno-Carrasco, M.T., Santiago, C., Carolis, C., Arranz, R., Blanco, J., Magri, G.

(2024) Nat Commun 15: 1051-1051

Released	2024-01-10
Method	ELECTRON MICROSCOPY 4.41 Å
Organisms	Homo sapiens Severe acute respiratory syndrome coronavirus
Macromolecule	17T2 Fab heavy chain (protein) 17T2 Fab light chain (protein) Spike protein S2' (protein)
Unique branched monosaccharides	NAG

1 to 25 of 25 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2OR7 | pdb_00002or7

2OR8 | pdb_00002or8

3BI9 | pdb_00003bi9

3BIA | pdb_00003bia

3BIB | pdb_00003bib

3INB | pdb_00003inb

3KAA | pdb_00003kaa

3O74 | pdb_00003o74

3O75 | pdb_00003o75

4F2M | pdb_00004f2m

4F5C | pdb_00004f5c

4V0S | pdb_00004v0s

5IEH | pdb_00005ieh

5IEK | pdb_00005iek

5LDS | pdb_00005lds

5LG6 | pdb_00005lg6

5LHD | pdb_00005lhd

6QB8 | pdb_00006qb8

6ZN2 | pdb_00006zn2

6ZVP | pdb_00006zvp

6ZZU | pdb_00006zzu

7A2G | pdb_00007a2g

7PIM | pdb_00007pim

7ZHS | pdb_00007zhs

8C89 | pdb_00008c89