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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Schilthuis, J.G."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Escherichia coli (5)
	Pseudomonas aeruginosa PAO1 (3)
	Pseudomonas aeruginosa (2)
	Methylorubrum extorquens PA1 (1)
	Synechococcus elongatus PCC 7942 = FACHB-805 (1)
	Thermotoga maritima (1)

Taxonomy

Bacteria (13)

Experimental Method

X-RAY DIFFRACTION (13)

Polymer Entity Type

Protein (13)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (7)
	2.0 - 2.5 (5)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (4)
	2010 - 2014 (6)
	2015 - 2019 (1)

Enzyme Classification Name

	Hydrolases (11)
	Lyases (1)
	Oxidoreductases (1)

Symmetry Type

	Cyclic (7)
	Dihedral (7)
	Asymmetric (3)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	All beta proteins (3)
	Alpha and beta proteins (a+b) (2)

AllSelected

1 to 13 of 13 Structures

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1ONW \| pdb_00001onw	Download File View File

Crystal structure of Isoaspartyl Dipeptidase from E. coli

Thoden, J.B., Marti-Arbona, R., Raushel, F.M., Holden, H.M.

(2003) Biochemistry 42: 4874-4882

Released	2003-05-06
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Escherichia coli
Macromolecule	Isoaspartyl dipeptidase (protein)
Unique Ligands	CL, EDO, MG, NA, ZN

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1ONX \| pdb_00001onx	Download File View File

Crystal structure of isoaspartyl dipeptidase from escherichia coli complexed with aspartate

Thoden, J.B., Marti-Arbona, R., Raushel, F.M., Holden, H.M.

(2003) Biochemistry 42: 4874-4882

Released	2003-05-06
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	Isoaspartyl dipeptidase (protein)
Unique Ligands	ASP, ZN

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1YBQ \| pdb_00001ybq	Download File View File

Crystal structure of Escherichia coli isoaspartyl dipeptidase mutant D285N complexed with beta-aspartylhistidine

Marti-Arbona, R., Fresquet, V., Thoden, J.B., Davis, M.L., Holden, H.M., Raushel, F.M.

(2005) Biochemistry 44: 7115-7124

Released	2005-04-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	Isoaspartyl dipeptidase (protein)
Unique Ligands	BDH, ZN

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2AQO \| pdb_00002aqo	Download File View File

Crystal structure of E. coli Isoaspartyl Dipeptidase Mutant E77Q

Marti-Arbona, R., Thoden, J.B., Holden, H.M., Raushel, F.M.

(2005) Bioorg Chem 33: 448-458

Released	2005-12-13
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Escherichia coli
Macromolecule	Isoaspartyl dipeptidase (protein)
Unique Ligands	ZN

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2AQV \| pdb_00002aqv	Download File View File

Crystal Structure of E. coli Isoaspartyl Dipeptidase mutant Y137F

Marti-Arbona, R., Thoden, J.B., Holden, H.M., Raushel, F.M.

(2005) Bioorg Chem 33: 448-458

Released	2005-12-13
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Escherichia coli
Macromolecule	Isoaspartyl dipeptidase (protein)
Unique Ligands	ZN

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2PLM \| pdb_00002plm	Download File View File

Crystal structure of the protein TM0936 from Thermotoga maritima complexed with ZN and S-inosylhomocysteine

Fedorov, A.A., Fedorov, E.V., Hermann, J.C., Marti-Arbona, R., Shoichet, B.K., Raushel, F.M., Almo, S.C.

(2007) Nature 448: 775-779

Released	2007-07-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Thermotoga maritima
Macromolecule	Uncharacterized protein (protein)
Unique Ligands	SIB, ZN

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3MDU \| pdb_00003mdu	Download File View File

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutamate

Fedorov, A.A., Fedorov, E.V., Marti-Arbona, R., Raushel, F.M., Almo, S.C.

(2015) Biochemistry 54: 890-897

Released	2011-03-09
Method	X-RAY DIFFRACTION 1.4003 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	N-formimino-L-Glutamate Iminohydrolase (protein)
Unique Ligands	GOL, NGQ, ZN

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3MDW \| pdb_00003mdw	Download File View File

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate

Fedorov, A.A., Fedorov, E.V., Marti-Arbona, R., Raushel, F.M., Almo, S.C.

(2015) Biochemistry 54: 890-897

Released	2011-03-09
Method	X-RAY DIFFRACTION 1.8979 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	N-formimino-L-Glutamate Iminohydrolase (protein)
Unique Ligands	GOL, NFQ, PO4, ZN

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4RDV \| pdb_00004rdv	Download File View File

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate

Fedorov, A.A., Fedorov, E.V., Marti-Arbona, R., Raushel, F.M., Almo, S.C.

To be published

Released	2014-10-08
Method	X-RAY DIFFRACTION 2.08 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	N-FORMIMINO-L-GLUTAMATE IMINOHYDROLASE (protein)
Unique Ligands	EDO, GOL, NFQ, PO4, ZN

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4RDW \| pdb_00004rdw	Download File View File

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutaric acid

Fedorov, A.A., Fedorov, E.V., Marti-Arbona, R., Raushel, F.M., Almo, S.C.

To be published

Released	2014-10-08
Method	X-RAY DIFFRACTION 1.591 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	N-formimino-L-Glutamate Iminohydrolase (protein)
Unique Ligands	EDO, GOL, NGQ, PEG, ZN

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4ROP \| pdb_00004rop	Download File View File

Crystal structure of enolase from Synechococcus elongatus

Gonzalez, J.M., Marti-Arbona, R., Unkefer, C.J.

(2022) Acta Crystallogr F Struct Biol Commun 78: 177-184

Released	2014-12-17
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Synechococcus elongatus PCC 7942 = FACHB-805
Macromolecule	Enolase (protein)
Unique Ligands	CA

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4ROS \| pdb_00004ros	Download File View File

Crystal structure of Methylobacterium extorquens malate dehydrogenase complexed with oxaloacetate and adenosine-5-diphosphoribose

Gonzalez, J.M., Marti-Arbona, R., Unkefer, C.J.

To be published

Released	2014-12-17
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Methylorubrum extorquens PA1
Macromolecule	Malate dehydrogenase (protein)
Unique Ligands	APR, CA, OAA

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4RZB \| pdb_00004rzb	Download File View File

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate, SOAKED WITH MERCURY

Fedorov, A.A., Fedorov, E.V., Marti-Arbona, R., Raushel, F.M., Almo, S.C.

(2015) Biochemistry 54: 890-897

Released	2015-01-14
Method	X-RAY DIFFRACTION 1.863 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	N-formimino-L-Glutamate Iminohydrolase (protein)
Unique Ligands	GOL, HG, NFQ, SO4, ZN

1 to 13 of 13 Structures

Page 1 of 1

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1ONW | pdb_00001onw

Crystal structure of Isoaspartyl Dipeptidase from E. coli

1ONX | pdb_00001onx

Crystal structure of isoaspartyl dipeptidase from escherichia coli complexed with aspartate

1YBQ | pdb_00001ybq

Crystal structure of Escherichia coli isoaspartyl dipeptidase mutant D285N complexed with beta-aspartylhistidine

2AQO | pdb_00002aqo

Crystal structure of E. coli Isoaspartyl Dipeptidase Mutant E77Q

2AQV | pdb_00002aqv

Crystal Structure of E. coli Isoaspartyl Dipeptidase mutant Y137F

2PLM | pdb_00002plm

Crystal structure of the protein TM0936 from Thermotoga maritima complexed with ZN and S-inosylhomocysteine

3MDU | pdb_00003mdu

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutamate

3MDW | pdb_00003mdw

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate

4RDV | pdb_00004rdv

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate

4RDW | pdb_00004rdw

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutaric acid

4ROP | pdb_00004rop

Crystal structure of enolase from Synechococcus elongatus

4ROS | pdb_00004ros

Crystal structure of Methylobacterium extorquens malate dehydrogenase complexed with oxaloacetate and adenosine-5-diphosphoribose

4RZB | pdb_00004rzb

The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-formimino-L-Aspartate, SOAKED WITH MERCURY

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1ONW | pdb_00001onw

1ONX | pdb_00001onx

1YBQ | pdb_00001ybq

2AQO | pdb_00002aqo

2AQV | pdb_00002aqv

2PLM | pdb_00002plm

3MDU | pdb_00003mdu

3MDW | pdb_00003mdw

4RDV | pdb_00004rdv

4RDW | pdb_00004rdw

4ROP | pdb_00004rop

4ROS | pdb_00004ros

4RZB | pdb_00004rzb