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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Qi, X."

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Search Summary

This query matches 56 Structures.

Refinements

Structure Determination Methodology

experimental (56)

Scientific Name of Source Organism

	Homo sapiens (37)
	Mus musculus (12)
	Lassa virus Josiah (4)
	Listeria monocytogenes (4)
	Rhodobacter capsulatus (3)
	Bos taurus (2)
	Caenorhabditis elegans (2)
	Cricetulus griseus (2)
	Escherichia coli (2)
	Acetivibrio cellulolyticus (1)

More...

Taxonomy

	Eukaryota (43)
	Bacteria (11)
	Riboviria (4)

Experimental Method

	X-RAY DIFFRACTION (32)
	ELECTRON MICROSCOPY (24)

Polymer Entity Type

Protein (56)

Refinement Resolution (Å)

	1.0 - 1.5 (3)
	1.5 - 2.0 (16)
	2.0 - 2.5 (4)
	2.5 - 3.0 (6)
	3.0 - 3.5 (17)
	3.5 - 4.0 (9)
	4.0 - 4.5 (1)

Release Date

	2000 - 2004 (1)
	2010 - 2014 (18)
	2015 - 2019 (16)
	2020 - 2024 (18)
	2025 - 2029 (3)

Enzyme Classification Name

	Transferases (14)
	Hydrolases (12)
	Lyases (3)
	Oxidoreductases (2)
	Translocases (2)

Membrane Protein Annotation

	PDBTM (23)
	OPM (16)
	mpstruc (15)
	MemProtMD (12)

Symmetry Type

	Asymmetric (47)
	Cyclic (10)

SCOP Classification

	All alpha proteins (11)
	Alpha and beta proteins (a+b) (8)
	Alpha and beta proteins (a/b) (3)
	All beta proteins (2)
	Artifacts (1)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 56 Structures

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1QZN \| pdb_00001qzn	Download File View File

Crystal Structure Analysis of a type II cohesin domain from the cellulosome of Acetivibrio cellulolyticus

Frolow, F., Noach, I., Rosenheck, S., Lamed, R., Qi, X., Shimon, L.J.W., Bayer, E.A.

(2005) J Mol Biology 348: 1-12

Released	2004-09-21
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Acetivibrio cellulolyticus
Macromolecule	cellulosomal scaffoldin adaptor protein B (protein)

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2XN3 \| pdb_00002xn3	Download File View File

Crystal structure of thyroxine-binding globulin complexed with mefenamic acid

Qi, X., Yan, Y., Wei, Z., Zhou, A.

(2011) J Biological Chem 286: 16163

Released	2011-02-16
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Homo sapiens
Macromolecule	THYROXINE-BINDING GLOBULIN (protein)
Unique Ligands	ID8

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2XN5 \| pdb_00002xn5	Download File View File

Crystal structure of thyroxine-binding globulin complexed with Furosemide

Qi, X., Yan, Y., Wei, Z., Zhou, A.

(2011) J Biological Chem 286: 16163

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	THYROXINE-BINDING GLOBULIN (protein)
Unique Ligands	CA, EDO, FUN

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2XN6 \| pdb_00002xn6	Download File View File

Crystal structure of thyroxine-binding globulin complexed with thyroxine-fluoresein

Qi, X., Yan, Y., Wei, Z., Zhou, A.

(2011) J Biological Chem 286: 16163

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.29 Å
Organisms	Homo sapiens
Macromolecule	THYROXINE-BINDING GLOBULIN (protein)
Unique Ligands	CA, EDO, F6Y, T44

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2XN7 \| pdb_00002xn7	Download File View File

Crystal structure of thyroxine-binding globulin complexed with thyroxine-fluoresein (T405-CF)

Qi, X., Yan, Y., Wei, Z., Zhou, A.

(2011) J Biological Chem 286: 16163

Released	2011-02-16
Method	X-RAY DIFFRACTION 1.43 Å
Organisms	Homo sapiens
Macromolecule	THYROXINE-BINDING GLOBULIN (protein)
Unique Ligands	CA, EDO, F6Z, T44

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3MWP \| pdb_00003mwp	Download File View File

Nucleoprotein structure of lassa fever virus

Qi, X., Lan, S., Wang, W., Schelde, L.M., Dong, H., Wallat, G., Liang, Y., Ly, H., Dong, C., Scottish Structural Proteomics Facility (SSPF)

(2010) Nature 468: 779-783

Released	2010-12-01
Method	X-RAY DIFFRACTION 1.795 Å
Organisms	Lassa virus Josiah
Macromolecule	Nucleoprotein (protein)
Unique Ligands	ZN

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3MWT \| pdb_00003mwt	Download File View File

Crystal structure of Lassa fever virus nucleoprotein in complex with Mn2+

Qi, X., Lan, S., Wang, W., Schelde, L.M., Dong, H., Wallat, G., Liang, Y., Ly, H., Dong, C., Scottish Structural Proteomics Facility (SSPF)

(2010) Nature 468: 779-783

Released	2010-12-01
Method	X-RAY DIFFRACTION 1.982 Å
Organisms	Lassa virus Josiah
Macromolecule	Nucleoprotein (protein)
Unique Ligands	MN, ZN

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3MX2 \| pdb_00003mx2	Download File View File

Lassa fever virus Nucleoprotein complexed with dTTP

Qi, X., Lan, S., Wang, W., Schelde, L.M., Dong, H., Wallat, G., Liang, Y., Ly, H., Dong, C., Scottish Structural Proteomics Facility (SSPF)

(2010) Nature 468: 779-783

Released	2010-12-01
Method	X-RAY DIFFRACTION 1.983 Å
Organisms	Lassa virus Josiah
Macromolecule	Nucleoprotein (protein)
Unique Ligands	TTP, ZN

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3MX5 \| pdb_00003mx5	Download File View File

Lassa fever virus nucleoprotein complexed with UTP

Qi, X., Lan, S., Wang, W., Schelde, L.M., Dong, H., Wallat, G., Liang, Y., Ly, H., Dong, C., Scottish Structural Proteomics Facility (SSPF)

(2010) Nature 468: 779-783

Released	2010-12-01
Method	X-RAY DIFFRACTION 1.903 Å
Organisms	Lassa virus Josiah
Macromolecule	Nucleoprotein (protein)
Unique Ligands	UTP, ZN

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4KM8 \| pdb_00004km8	Download File View File

Crystal structure of Sufud60

Zhang, Y., Qi, X., Zhang, Z., Wu, G.

(2013) Nat Commun 4: 2608-2608

Released	2013-11-20
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Homo sapiens
Macromolecule	Suppressor of fused homolog (protein)

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4KM9 \| pdb_00004km9	Download File View File

Crystal structure of human Suppressor of Fused

Zhang, Y., Qi, X., Zhang, Z., Wu, G.

(2013) Nat Commun 4: 2608-2608

Released	2013-11-20
Method	X-RAY DIFFRACTION 3.19 Å
Organisms	Homo sapiens
Macromolecule	Suppressor of fused homolog (protein)

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4KMA \| pdb_00004kma	Download File View File

Crystal structure of Drosophila Suppressor of Fused

Zhang, Y., Qi, X., Zhang, Z., Wu, G.

(2013) Nat Commun 4: 2608-2608

Released	2013-11-20
Method	X-RAY DIFFRACTION 2.68 Å
Organisms	Drosophila melanogaster
Macromolecule	GM14141p (protein)

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4KMD \| pdb_00004kmd	Download File View File

Crystal structure of Sufud60-Gli1p

Zhang, Y., Qi, X., Zhang, Z., Wu, G.

(2013) Nat Commun 4: 2608-2608

Released	2013-11-20
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	Sufu (protein) Zinc finger protein GLI1 (protein)
Unique Ligands	DTT, GOL

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4KMH \| pdb_00004kmh	Download File View File

Crystal structure of Suppressor of Fused d20

Zhang, Y., Qi, X., Zhang, Z., Wu, G.

(2013) Nat Commun 4: 2608-2608

Released	2013-11-20
Method	X-RAY DIFFRACTION 3.04 Å
Organisms	Homo sapiens
Macromolecule	Suppressor of fused homolog (protein)

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4MP2 \| pdb_00004mp2	Download File View File

Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PA1

Gui, W.J., Tso, S.C., Chuang, J.L., Wu, C.Y., Qi, X., Tambar, U.K., Wynn, R.M., Chuang, D.T.

(2014) J Biological Chem 289: 4432-4443

Released	2014-01-01
Method	X-RAY DIFFRACTION 1.751 Å
Organisms	Homo sapiens
Macromolecule	[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (protein)
Unique Ligands	PV1, TLA

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4MP7 \| pdb_00004mp7	Download File View File

Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PA7

Gui, W.J., Tso, S.C., Chuang, J.L., Wu, C.Y., Qi, X., Tambar, U.K., Wynn, R.M., Chuang, D.T.

(2014) J Biological Chem 289: 4432-4443

Released	2014-01-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Homo sapiens
Macromolecule	[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (protein)
Unique Ligands	PFT, TLA

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4MPC \| pdb_00004mpc	Download File View File

Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PS2

Gui, W.J., Tso, S.C., Chuang, J.L., Wu, C.Y., Qi, X., Tambar, U.K., Wynn, R.M., Chuang, D.T.

(2014) J Biological Chem 289: 4432-4443

Released	2014-01-01
Method	X-RAY DIFFRACTION 1.699 Å
Organisms	Homo sapiens
Macromolecule	[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (protein)
Unique Ligands	PV2, TLA

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4MPE \| pdb_00004mpe	Download File View File

Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PS8

Gui, W.J., Tso, S.C., Chuang, J.L., Wu, C.Y., Qi, X., Tambar, U.K., Wynn, R.M., Chuang, D.T.

(2014) J Biological Chem 289: 4432-4443

Released	2014-01-01
Method	X-RAY DIFFRACTION 1.953 Å
Organisms	Homo sapiens
Macromolecule	[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (protein)
Unique Ligands	PV8, TLA

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4MPN \| pdb_00004mpn	Download File View File

Crystal structure of pyruvate dehydrogenase kinase isoform 2 in complex with inhibitor PS10

Gui, W.J., Tso, S.C., Chuang, J.L., Wu, C.Y., Qi, X., Tambar, U.K., Wynn, R.M., Chuang, D.T.

(2014) J Biological Chem 289: 4432-4443

Released	2014-01-01
Method	X-RAY DIFFRACTION 1.752 Å
Organisms	Homo sapiens
Macromolecule	[Pyruvate dehydrogenase [lipoamide]] kinase isozyme 2, mitochondrial (protein)
Unique Ligands	PV0, TLA

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4X30 \| pdb_00004x30	Download File View File

Crystal structure of human Thyroxine-binding globulin complexed with thyroine at 1.55 Angstrom resolution

Qi, X.

To be published

Released	2015-12-02
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Homo sapiens
Macromolecule	Thyroxine-binding globulin (protein)
Unique Ligands	EDO, F, GOL, NA, T44

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5E6N \| pdb_00005e6n	Download File View File

Crystal structure of C. elegans LGG-2

Qi, X., Ren, J.Q., Wu, F., Zhang, H., Feng, W.

(2015) Mol Cell 60: 914-929

Released	2016-01-06
Method	X-RAY DIFFRACTION 2.102 Å
Organisms	Caenorhabditis elegans
Macromolecule	Protein lgg-2 (protein)

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5E6O \| pdb_00005e6o	Download File View File

Crystal structure of C. elegans LGG-2 bound to an AIM/LIR motif

Qi, X., Ren, J.Q., Wu, F., Zhang, H., Feng, W.

(2015) Mol Cell 60: 914-929

Released	2016-01-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Caenorhabditis elegans Scheffersomyces stipitis
Macromolecule	Protein lgg-2 (protein) TRP-GLU-GLU-LEU (protein)

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5HV1 \| pdb_00005hv1	Download File View File

Rifampin phosphotransferase in complex with AMPPNP and rifampin from Listeria monocytogenes

Zhang, P., Qi, X.

(2016) Proc Natl Acad Sci U S A 113: 3803-3808

Released	2016-03-30
Method	X-RAY DIFFRACTION 3.103 Å
Organisms	Listeria monocytogenes
Macromolecule	Phosphoenolpyruvate synthase (protein)
Unique Ligands	ANP, MG, RFP

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5HV2 \| pdb_00005hv2	Download File View File

Rifampin phosphotransferase G527Y mutant from Listeria monocytogenes

Zhang, P., Qi, X.

(2016) Proc Natl Acad Sci U S A 113: 3803-3808

Released	2016-03-30
Method	X-RAY DIFFRACTION 2.912 Å
Organisms	Listeria monocytogenes
Macromolecule	Phosphoenolpyruvate synthase (protein)

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5HV3 \| pdb_00005hv3	Download File View File

Rifampin phosphotransferase G527Y mutant in complex with AMPPNP from Listeria monocytogenes

Zhang, P., Qi, X.

(2016) Proc Natl Acad Sci U S A 113: 3803-3808

Released	2016-03-30
Method	X-RAY DIFFRACTION 3.118 Å
Organisms	Listeria monocytogenes
Macromolecule	Phosphoenolpyruvate synthase (protein)
Unique Ligands	ANP, MG

1 to 25 of 56 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1QZN | pdb_00001qzn

2XN3 | pdb_00002xn3

2XN5 | pdb_00002xn5

2XN6 | pdb_00002xn6

2XN7 | pdb_00002xn7

3MWP | pdb_00003mwp

3MWT | pdb_00003mwt

3MX2 | pdb_00003mx2

3MX5 | pdb_00003mx5

4KM8 | pdb_00004km8

4KM9 | pdb_00004km9

4KMA | pdb_00004kma

4KMD | pdb_00004kmd

4KMH | pdb_00004kmh

4MP2 | pdb_00004mp2

4MP7 | pdb_00004mp7

4MPC | pdb_00004mpc

4MPE | pdb_00004mpe

4MPN | pdb_00004mpn

4X30 | pdb_00004x30

5E6N | pdb_00005e6n

5E6O | pdb_00005e6o

5HV1 | pdb_00005hv1

5HV2 | pdb_00005hv2

5HV3 | pdb_00005hv3