RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Malashkevich, V.N."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 247 Structures.

Refinements

Structure Determination Methodology

experimental (247)

Scientific Name of Source Organism

	Rhizobium etli CFN 42 (20)
	Escherichia coli (19)
	Sinorhizobium meliloti 1021 (12)
	Homo sapiens (10)
	Gallus gallus (9)
	Streptomyces avidinii (8)
	synthetic construct (8)
	Escherichia coli K-12 (6)
	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (5)
	Burkholderia cepacia (4)

More...

Taxonomy

	Bacteria (177)
	Eukaryota (36)
	Riboviria (10)
	other sequences (8)
	Archaea (6)
	Eukaryota (eukaryotes) (5)
	Riboviria (RNA viruses and viroids) (4)
	Duplodnaviria (1)

Experimental Method

X-RAY DIFFRACTION (247)

Polymer Entity Type

	Protein (247)
	RNA (2)

Refinement Resolution (Å)

	1.0 - 1.5 (18)
	1.5 - 2.0 (116)
	2.0 - 2.5 (85)
	2.5 - 3.0 (27)
	3.0 - 3.5 (1)

Release Date

	1980 - 1984 (1)
	1990 - 1994 (6)
	1995 - 1999 (19)
	2000 - 2004 (15)
	2005 - 2009 (68)
	2010 - 2014 (129)
	2015 - 2019 (9)

Enzyme Classification Name

	Transferases (45)
	Oxidoreductases (23)
	Hydrolases (19)
	Lyases (15)
	Isomerases (4)

Membrane Protein Annotation

OPM (1)

Symmetry Type

	Cyclic (140)
	Asymmetric (70)
	Dihedral (68)

SCOP Classification

	Alpha and beta proteins (a/b) (112)
	Artifacts (70)
	Coiled coil proteins (21)
	Alpha and beta proteins (a+b) (29)
	All alpha proteins (11)
	All beta proteins (14)
	Multi-domain proteins (alpha and beta) (6)
	Membrane and cell surface proteins and peptides (1)
	Small proteins (1)

AllSelected

1 to 25 of 247 Structures

Page 1 of 10

Sort by

Explore in 3D

1AAT \| pdb_00001aat	Download File View File

OXOGLUTARATE-INDUCED CONFORMATIONAL CHANGES IN CYTOSOLIC ASPARTATE AMINOTRANSFERASE

Harutyunyan, E.G., Malashkevich, V.N.

(1982) Dokl Akad Nauk SSSR 267: 1257-1261

Released	1982-10-21
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Gallus gallus
Macromolecule	CYTOSOLIC ASPARTATE AMINOTRANSFERASE (protein)

Explore in 3D

1AHE \| pdb_00001ahe	Download File View File

ASPARTATE AMINOTRANSFERASE HEXAMUTANT

Malashkevich, V.N., Jansonius, J.N.

(1995) Nat Struct Biol 2: 548-553

Released	1995-09-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	PLP, SO4

Explore in 3D

1AHF \| pdb_00001ahf	Download File View File

ASPARTATE AMINOTRANSFERASE HEXAMUTANT

Malashkevich, V.N., Jansonius, J.N.

(1995) Nat Struct Biol 2: 548-553

Released	1995-09-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	IOP, PLP, SO4

Explore in 3D

1AHG \| pdb_00001ahg	Download File View File

ASPARTATE AMINOTRANSFERASE HEXAMUTANT

Malashkevich, V.N., Jansonius, J.N.

(1995) Nat Struct Biol 2: 548-553

Released	1995-09-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli K-12
Macromolecule	Aspartate aminotransferase (protein)
Unique Ligands	PLP, TYR

Explore in 3D

1AHX \| pdb_00001ahx	Download File View File

ASPARTATE AMINOTRANSFERASE HEXAMUTANT

Malashkevich, V.N., Jansonius, J.N.

(1995) Nat Struct Biol 2: 548-553

Released	1995-09-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	HCI, PLP

Explore in 3D

1AHY \| pdb_00001ahy	Download File View File

ASPARTATE AMINOTRANSFERASE HEXAMUTANT

Malashkevich, V.N., Jansonius, J.N.

(1995) Nat Struct Biol 2: 548-553

Released	1995-09-15
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	MAE, PLP

Explore in 3D

1AKA \| pdb_00001aka	Download File View File

STRUCTURAL BASIS FOR THE CATALYTIC ACTIVITY OF ASPARTATE AMINOTRANSFERASE K258H LACKING ITS PYRIDOXAL-5'-PHOSPHATE-BINDING LYSINE RESIDUE

Malashkevich, V.N., Jansonius, J.N.

(1995) Biochemistry 34: 405-414

Released	1994-07-31
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Gallus gallus
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	PLP, PO4

Explore in 3D

1AKB \| pdb_00001akb	Download File View File

STRUCTURAL BASIS FOR THE CATALYTIC ACTIVITY OF ASPARTATE AMINOTRANSFERASE K258H LACKING ITS PYRIDOXAL-5'-PHOSPHATE-BINDING LYSINE RESIDUE

Malashkevich, V.N., Jansonius, J.N.

(1995) Biochemistry 34: 405-414

Released	1994-07-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Gallus gallus
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	PPD

Explore in 3D

1AKC \| pdb_00001akc	Download File View File

Structural basis for the catalytic activity of aspartate aminotransferase K258H lacking its pyridoxal-5'-phosphate-binding lysine residue

Malashkevich, V.N., Jansonius, J.N.

(1995) Biochemistry 34: 405-414

Released	1994-07-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Gallus gallus
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	PPE

Explore in 3D

1ARG \| pdb_00001arg	Download File View File

Aspartate aminotransferase, phospho-5'-pyridoxyl aspartate complex

Malashkevich, V.N., Jansonius, J.N.

(1995) Eur J Biochem 232: 686-690

Released	1995-11-14
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	PPD

Explore in 3D

1ARH \| pdb_00001arh	Download File View File

ASPARTATE AMINOTRANSFERASE, Y225R/R386A MUTANT

Malashkevich, V.N., Jansonius, J.N.

(1995) Eur J Biochem 232: 686-690

Released	1995-11-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	PPD

Explore in 3D

1ARI \| pdb_00001ari	Download File View File

Aspartate aminotransferase, W140H mutant, maleate complex

Malashkevich, V.N., Jansonius, J.N.

(1995) Eur J Biochem 227: 481-487

Released	1995-11-14
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)
Unique Ligands	MAE, PLP

Explore in 3D

1BQA \| pdb_00001bqa	Download File View File

ASPARTATE AMINOTRANSFERASE P195A MUTANT

Malashkevich, V.N., Jansonius, J.N.

(1999) Biochemistry 38: 905-913

Released	1999-05-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)

Explore in 3D

1BQD \| pdb_00001bqd	Download File View File

ASPARTATE AMINOTRANSFERASE P138A/P195A DOUBLE MUTANT

Malashkevich, V.N., Jansonius, J.N.

(1999) Biochemistry 38: 905-913

Released	1999-05-11
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Escherichia coli
Macromolecule	ASPARTATE AMINOTRANSFERASE (protein)

Explore in 3D

1CZQ \| pdb_00001czq	Download File View File

CRYSTAL STRUCTURE OF THE D10-P1/IQN17 COMPLEX: A D-PEPTIDE INHIBITOR OF HIV-1 ENTRY BOUND TO THE GP41 COILED-COIL POCKET.

Eckert, D.M., Malashkevich, V.N., Hong, L.H., Carr, P.A., Kim, P.S.

(1999) Cell 99: 103-115

Released	1999-10-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Human immunodeficiency virus Saccharomyces cerevisiae
Macromolecule	D-PEPTIDE INHIBITOR (protein) FUSION PROTEIN BETWEEN THE HYDROPHOBIC POCKET OF HIV GP41 AND GCN4-PIQI (protein)
Unique Ligands	CL

Explore in 3D

1D7R \| pdb_00001d7r	Download File View File

CRYSTAL STRUCTURE OF THE COMPLEX OF 2,2-DIALKYLGLYCINE DECARBOXYLASE WITH 5PA

Malashkevich, V.N., Toney, M.D., Strop, P., Keller, J., Jansonius, J.N.

(1999) J Mol Biology 294: 193-200

Released	1999-11-19
Method	X-RAY DIFFRACTION 2 Å
Organisms	Burkholderia cepacia
Macromolecule	PROTEIN (2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE)) (protein)
Unique Ligands	5PA, K, NA

Explore in 3D

1D7S \| pdb_00001d7s	Download File View File

CRYSTAL STRUCTURE OF THE COMPLEX OF 2,2-DIALKYLGLYCINE DECARBOXYLASE WITH DCS

Malashkevich, V.N., Toney, M.D., Strop, P., Keller, J., Jansonius, J.N.

(1999) J Mol Biology 294: 193-200

Released	1999-11-19
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Burkholderia cepacia
Macromolecule	PROTEIN (2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE)) (protein)
Unique Ligands	DCS, K, NA

Explore in 3D

1D7U \| pdb_00001d7u	Download File View File

Crystal structure of the complex of 2,2-dialkylglycine decarboxylase with LCS

Malashkevich, V.N., Toney, M.D., Strop, P., Keller, J., Jansonius, J.N.

(1999) J Mol Biology 294: 193-200

Released	1999-11-19
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Burkholderia cepacia
Macromolecule	PROTEIN (2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE)) (protein)
Unique Ligands	K, LCS, NA

Explore in 3D

1D7V \| pdb_00001d7v	Download File View File

CRYSTAL STRUCTURE OF THE COMPLEX OF 2,2-DIALKYLGLYCINE DECARBOXYLASE WITH NMA

Malashkevich, V.N., Toney, M.D., Strop, P., Keller, J., Jansonius, J.N.

(1999) J Mol Biology 294: 193-200

Released	1999-11-19
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Burkholderia cepacia
Macromolecule	PROTEIN (2,2-DIALKYLGLYCINE DECARBOXYLASE (PYRUVATE)) (protein)
Unique Ligands	K, NA, NMA

Explore in 3D

1DV8 \| pdb_00001dv8	Download File View File

CRYSTAL STRUCTURE OF THE CARBOHYDRATE RECOGNITION DOMAIN OF THE H1 SUBUNIT OF THE ASIALOGLYCOPROTEIN RECEPTOR

Meier, M., Bider, M.D., Malashkevich, V.N., Spiess, M., Burkhard, P.

(2000) J Mol Biology 300: 857-865

Released	2000-07-26
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	ASIALOGLYCOPROTEIN RECEPTOR 1 (protein)
Unique Ligands	CA, CL

Explore in 3D

1FBM \| pdb_00001fbm	Download File View File

ASSEMBLY DOMAIN OF CARTILAGE OLIGOMERIC MATRIX PROTEIN IN COMPLEX WITH ALL-TRANS RETINOL

Guo, Y., Bozic, D., Malashkevich, V.N., Kammerer, R.A., Schulthess, T.

(1998) EMBO J 17: 5265-5272

Released	2000-08-02
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Rattus norvegicus
Macromolecule	PROTEIN (CARTILAGE OLIGOMERIC MATRIX PROTEIN) (protein)
Unique Ligands	RTL

Explore in 3D

1G2C \| pdb_00001g2c	Download File View File

HUMAN RESPIRATORY SYNCYTIAL VIRUS FUSION PROTEIN CORE

Zhao, X., Singh, M., Malashkevich, V.N., Kim, P.S.

(2000) Proc Natl Acad Sci U S A 97: 14172-14177

Released	2001-01-03
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Human respiratory syncytial virus strain RSS-2
Macromolecule	FUSION PROTEIN (F) (protein)

Explore in 3D

1IJ0 \| pdb_00001ij0	Download File View File

Coiled Coil Trimer GCN4-pVLS Ser at Buried D Position

Akey, D.L., Malashkevich, V.N., Kim, P.S.

(2001) Biochemistry 40: 6352-6360

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	GENERAL CONTROL PROTEIN GCN4 (protein)
Unique Ligands	ZN

Explore in 3D

1IJ1 \| pdb_00001ij1	Download File View File

GCN4-pVLT Coiled-coil Trimer with Threonine at the d(12) Position

Akey, D.L., Malashkevich, V.N., Kim, P.S.

(2001) Biochemistry 40: 6352-6360

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	GENERAL CONTROL PROTEIN GCN4 (protein)
Unique Ligands	ZN

Explore in 3D

1IJ2 \| pdb_00001ij2	Download File View File

GCN4-pVTL Coiled-coil Trimer with Threonine at the a(16) position

Akey, D.L., Malashkevich, V.N., Kim, P.S.

(2001) Biochemistry 40: 6352-6360

Released	2001-08-08
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Macromolecule	GENERAL CONTROL PROTEIN GCN4 (protein)
Unique Ligands	CD

1 to 25 of 247 Structures

Page 1 of 10

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AAT | pdb_00001aat

1AHE | pdb_00001ahe

1AHF | pdb_00001ahf

1AHG | pdb_00001ahg

1AHX | pdb_00001ahx

1AHY | pdb_00001ahy

1AKA | pdb_00001aka

1AKB | pdb_00001akb

1AKC | pdb_00001akc

1ARG | pdb_00001arg

1ARH | pdb_00001arh

1ARI | pdb_00001ari

1BQA | pdb_00001bqa

1BQD | pdb_00001bqd

1CZQ | pdb_00001czq

1D7R | pdb_00001d7r

1D7S | pdb_00001d7s

1D7U | pdb_00001d7u

1D7V | pdb_00001d7v

1DV8 | pdb_00001dv8

1FBM | pdb_00001fbm

1G2C | pdb_00001g2c

1IJ0 | pdb_00001ij0

1IJ1 | pdb_00001ij1

1IJ2 | pdb_00001ij2