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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Liu, Z."

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Search Summary

This query matches 251 Structures.

Refinements

Structure Determination Methodology

experimental (251)

Scientific Name of Source Organism

	Homo sapiens (128)
	Human immunodeficiency virus 1 (27)
	Mus musculus (17)
	Severe acute respiratory syndrome coronavirus 2 (15)
	Escherichia coli (11)
	Bos taurus (4)
	Chlamydomonas reinhardtii (4)
	Micromonas commoda (4)
	Ostreococcus tauri (4)
	synthetic construct (4)

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Taxonomy

	Eukaryota (169)
	Riboviria (50)
	Bacteria (35)
	Duplodnaviria (11)
	other sequences (4)
	Archaea (3)
	unclassified sequences (3)
	Eukaryota (eukaryotes) (2)
	Monodnaviria (1)
	Riboviria (RNA viruses and viroids) (1)

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Experimental Method

	X-RAY DIFFRACTION (140)
	ELECTRON MICROSCOPY (78)
	SOLUTION NMR (33)

Polymer Entity Type

	Protein (248)
	DNA (9)
	RNA (8)

Refinement Resolution (Å)

	0.5 - 1.0 (2)
	1.0 - 1.5 (11)
	1.5 - 2.0 (53)
	2.0 - 2.5 (28)
	2.5 - 3.0 (52)
	3.0 - 3.5 (51)
	3.5 - 4.0 (12)
	4.0 - 4.5 (5)
	> 4.5 (4)

Release Date

	2000 - 2004 (12)
	2005 - 2009 (15)
	2010 - 2014 (55)
	2015 - 2019 (60)
	2020 - 2024 (92)
	2025 - 2029 (17)

Enzyme Classification Name

	Hydrolases (41)
	Transferases (30)
	Oxidoreductases (10)
	Translocases (3)
	Isomerases (2)
	Ligases (3)

Membrane Protein Annotation

	PDBTM (49)
	OPM (36)
	MemProtMD (41)
	mpstruc (27)

Symmetry Type

	Asymmetric (154)
	Cyclic (83)
	Icosahedral (9)
	Dihedral (7)
	Helical (2)

SCOP Classification

	All beta proteins (34)
	Artifacts (14)
	Alpha and beta proteins (a+b) (14)
	All alpha proteins (10)
	Alpha and beta proteins (a/b) (9)
	Membrane and cell surface proteins and peptides (2)
	Small proteins (4)
	Designed proteins (3)
	Multi-domain proteins (alpha and beta) (2)
	Peptides (2)

AllSelected

1 to 25 of 251 Structures

Page 1 of 11

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1D8B \| pdb_00001d8b	Download File View File

NMR STRUCTURE OF THE HRDC DOMAIN FROM SACCHAROMYCES CEREVISIAE RECQ HELICASE

Liu, Z., Macias, M.J., Bottomley, M.J., Stier, G., Linge, J.P., Nilges, M., Bork, P., Sattler, M.

(1999) Structure 7: 1557-1566

Released	2000-01-10
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	SGS1 RECQ HELICASE (protein)

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1G3F \| pdb_00001g3f	Download File View File

NMR STRUCTURE OF A 9 RESIDUE PEPTIDE FROM SMAC/DIABLO COMPLEXED TO THE BIR3 DOMAIN OF XIAP

Liu, Z., Sun, C., Olejniczak, E.T., Meadows, R.P., Betz, S.F., Oost, T., Herrmann, J., Wu, J.C., Fesik, S.W.

(2000) Nature 408: 1004-1008

Released	2001-01-10
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	INHIBITOR OF APOPTOSIS PROTEIN 3 (protein) SMAC (protein)
Unique Ligands	ZN

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1H5P \| pdb_00001h5p	Download File View File

Solution structure of the human Sp100b SAND domain by heteronuclear NMR.

Bottomley, M.J., Liu, Z., Collard, M.W., Huggenvik, J.I., Gibson, T.J., Sattler, M.

(2001) Nat Struct Biol 8: 626-633

Released	2001-07-06
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	NUCLEAR AUTOANTIGEN SP100-B (protein)

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1K1G \| pdb_00001k1g	Download File View File

STRUCTURAL BASIS FOR RECOGNITION OF THE INTRON BRANCH SITE RNA BY SPLICING FACTOR 1

Liu, Z., Luyten, I., Bottomley, M.J., Messias, A.C., Houngninou-Molango, S., Sprangers, R., Zanier, K., Kramer, A., Sattler, M.

(2001) Science 294: 1098-1102

Released	2001-11-07
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	SF1-Bo isoform (protein) 5'-R(UPAPUPAPCPUPAPAPCPAP*A)-3' (nucleic acid)

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1MOT \| pdb_00001mot	Download File View File

NMR Structure Of Extended Second Transmembrane Domain Of Glycine Receptor alpha1 Subunit in SDS Micelles

Yushmanov, V.E., Mandal, P.K., Liu, Z., Tang, P., Xu, Y.

(2003) Biochemistry 42: 3989-3995

Released	2003-09-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Glycine Receptor alpha-1 CHAIN (protein)

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1P0R \| pdb_00001p0r	Download File View File

Solution Structure of UBL5 a human Ubiquitin-Like Protein

McNally, T., Huang, Q., Janis, R.S., Liu, Z., Olejniczak, E.T., Reilly, R.M.

(2003) Protein Sci 12: 1562-1566

Released	2003-10-28
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	ubiquitin-like 5 (protein)

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1RIJ \| pdb_00001rij	Download File View File

E6-bind Trp-cage (E6apn1)

Liu, Y., Liu, Z., Androphy, E., Chen, J., Baleja, J.D.

(2004) Biochemistry 43: 7421-7431

Released	2004-08-03
Method	SOLUTION NMR
Macromolecule	E6apn1 peptide (protein)

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1RIK \| pdb_00001rik	Download File View File

E6-binding zinc finger (E6apc1)

Liu, Y., Liu, Z., Androphy, E., Chen, J., Baleja, J.D.

(2004) Biochemistry 43: 7421-7431

Released	2004-08-03
Method	SOLUTION NMR
Macromolecule	E6apc1 peptide (protein)

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1RIM \| pdb_00001rim	Download File View File

E6-binding zinc finger (E6apc2)

Liu, Y., Liu, Z., Androphy, E., Chen, J., Baleja, J.D.

(2004) Biochemistry 43: 7421-7431

Released	2004-08-03
Method	SOLUTION NMR
Macromolecule	E6apc2 peptide (protein)

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1RWT \| pdb_00001rwt	Download File View File

Crystal Structure of Spinach Major Light-harvesting complex at 2.72 Angstrom Resolution

Liu, Z., Yan, H., Wang, K., Kuang, T., Zhang, J., Gui, L., An, X., Chang, W.

(2004) Nature 428: 287-292

Released	2004-03-30
Method	X-RAY DIFFRACTION 2.72 Å
Organisms	Spinacia oleracea
Macromolecule	Chlorophyll A-B binding protein, chloroplast (protein)
Unique Ligands	BNG, CHL, CLA, DGD, LHG, LUT, NA, NEX, XAT

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1SSK \| pdb_00001ssk	Download File View File

Structure of the N-terminal RNA-binding Domain of the SARS CoV Nucleocapsid Protein

Huang, Q., Yu, L., Petros, A.M., Gunasekera, A., Liu, Z., Xu, N., Hajduk, P., Mack, J., Fesik, S.W., Olejniczak, E.T.

(2004) Biochemistry 43: 6059-6063

Released	2004-06-08
Method	SOLUTION NMR
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	Nucleocapsid protein (protein)

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1VRY \| pdb_00001vry	Download File View File

Second and Third Transmembrane Domains of the Alpha-1 Subunit of Human Glycine Receptor

Ma, D., Liu, Z., Li, L., Tang, P., Xu, Y.

(2005) Biochemistry 44: 8790-8800

Released	2005-07-26
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Glycine receptor alpha-1 chain (protein)

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1W9G \| pdb_00001w9g	Download File View File

Structure of ERH (Enhencer of Rudimentary Gene)

Wan, C., Tempel, W., Liu, Z., Wang, B.-C., Rose, R.B.

(2005) Biochemistry 44: 5017

Released	2005-04-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	ENHANCER OF RUDIMENTARY HOMOLOG (protein)

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1XOX \| pdb_00001xox	Download File View File

SOLUTION STRUCTURE OF HUMAN SURVIVIN

Sun, C., Nettesheim, D., Liu, Z., Olejniczak, E.T.

(2005) Biochemistry 44: 11-17

Released	2005-01-18
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Apoptosis inhibitor survivin (protein)
Unique Ligands	ZN

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1Y29 \| pdb_00001y29	Download File View File

Three dimensional solution structure of huwentoxin-x by 2D 1H-NMR

Liu, Z., Liang, S.

(2006) J Biological Chem 281: 8628-8635

Released	2004-12-07
Method	SOLUTION NMR
Organisms	Cyriopagopus schmidti
Macromolecule	huwentoxin-x (protein)

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1ZGH \| pdb_00001zgh	Download File View File

Methionyl-tRNA formyltransferase from Clostridium thermocellum

Yang, H., Kataeva, I., Xu, H., Zhao, M., Chang, J., Liu, Z., Chen, L., Tempel, W., Habel, J., Zhou, W., Lee, D., Lin, D., Chang, S., Arendall III, W.B., Richardson, J.S., Richardson, D.C., Rose, J.P., Wang, B., Southeast Collaboratory for Structural Genomics (SECSG)

To be published

Released	2005-05-03
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Acetivibrio thermocellus ATCC 27405
Macromolecule	Methionyl-tRNA formyltransferase (protein)
Unique Ligands	UNX

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2AIU \| pdb_00002aiu	Download File View File

Crystal Structure of Mouse Testicular Cytochrome C at 1.6 Angstrom

Liu, Z., Ye, S., Lin, H., Rao, Z., Liu, X.J.

(2006) Proc Natl Acad Sci U S A 103: 8965-8970

Released	2006-07-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mus musculus
Macromolecule	Cytochrome c, testis-specific (protein)
Unique Ligands	HEM, PO4

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2GER \| pdb_00002ger	Download File View File

Crystal Structure and Oxidative Mechanism of Human Pyrroline-5-carboxylate Reductase

Meng, Z., Lou, Z., Liu, Z., Rao, Z.

(2006) J Mol Biology 359: 1364-1377

Released	2006-09-19
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Pyrroline-5-carboxylate reductase 1 (protein)

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2GR9 \| pdb_00002gr9	Download File View File

Crystal structure of P5CR complexed with NADH

Meng, Z., Lou, Z., Liu, Z., Rao, Z.

(2006) J Mol Biology 359: 1364-1377

Released	2006-10-03
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Pyrroline-5-carboxylate reductase 1 (protein)
Unique Ligands	GLU, NAI

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2GRA \| pdb_00002gra	Download File View File

crystal structure of Human Pyrroline-5-carboxylate Reductase complexed with nadp

Meng, Z., Lou, Z., Liu, Z., Rao, Z.

(2006) J Mol Biology 359: 1364-1377

Released	2006-10-03
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Homo sapiens
Macromolecule	Pyrroline-5-carboxylate reductase 1 (protein)
Unique Ligands	GLU, NAP

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2JIX \| pdb_00002jix	Download File View File

Crystal structure of ABT-007 FAB fragment with the soluble domain of EPO receptor

Liu, Z., Stoll, V.S., DeVries, P., Jakob, C.G., Xie, N., Simmer, R.L., Lacy, S.E., Egan, D.A., Harlan, J.E., Lesniewski, R.R., Reilly, E.B.

(2007) Blood 110: 2408

Released	2007-07-10
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Homo sapiens
Macromolecule	ABT-007 FAB FRAGMENT (protein) ERYTHROPOIETIN RECEPTOR (protein)

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2JTB \| pdb_00002jtb	Download File View File

Three dimensional solution structure of hainantoxin-III by 2D 1H-NMR

Zhu, Q., Liu, Z., Liang, S.

To be published

Released	2007-08-21
Method	SOLUTION NMR
Organisms	Haplopelma hainanum
Macromolecule	Hainantoxin-3 (protein)

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2JXN \| pdb_00002jxn	Download File View File

Solution Structure of S. cerevisiae PDCD5-like Protein Ymr074cp

Hong, J., Zhang, J., Liu, Z., Shi, Y., Wu, J.

To be published

Released	2008-12-02
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	Uncharacterized protein YMR074C (protein)
Unique Ligands	MTN

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2LQC \| pdb_00002lqc	Download File View File

NMR solution structure of a Ca2+-Calmodulin with a binding motif (NSCaTE) peptide from the N-terminal cytoplasmic domain of the L-type Voltage-Cated Calcium Channel alpha1C subunit

Liu, Z.

(2012) Front Mol Neurosci 5: 38-38

Released	2012-06-06
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Calmodulin (protein) Voltage-dependent L-type calcium channel subunit alpha-1C (protein)
Unique Ligands	CA