RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Structure Author = "Hankeln, T."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 1,006 Structures.

Refinements

Structure Determination Methodology

experimental (1,006)

Scientific Name of Source Organism

	Homo sapiens (493)
	synthetic construct (135)
	Severe acute respiratory syndrome coronavirus 2 (93)
	Physarum polycephalum (42)
	Arabidopsis thaliana (31)
	Escherichia coli (31)
	Mycobacterium tuberculosis H37Rv (27)
	Saccharomyces cerevisiae S288C (23)
	Mycolicibacterium smegmatis MC2 155 (20)
	Escherichia coli K-12 (18)

More...

Taxonomy

	Eukaryota (700)
	Bacteria (197)
	Riboviria (151)
	other sequences (135)
	Varidnaviria (30)
	Duplodnaviria (24)
	Viruses incertae sedis (3)
	unclassified sequences (3)
	Monodnaviria (2)
	Riboviria (RNA viruses and viroids) (2)

More...

Experimental Method

	X-RAY DIFFRACTION (499)
	ELECTRON MICROSCOPY (498)
	SOLUTION NMR (9)

Polymer Entity Type

	Protein (998)
	DNA (229)
	RNA (50)
	NA-hybrid (21)

Refinement Resolution (Å)

	1.0 - 1.5 (23)
	1.5 - 2.0 (203)
	2.0 - 2.5 (149)
	2.5 - 3.0 (155)
	3.0 - 3.5 (265)
	3.5 - 4.0 (150)
	4.0 - 4.5 (33)
	> 4.5 (18)

Release Date

	1995 - 1999 (6)
	2000 - 2004 (14)
	2005 - 2009 (19)
	2010 - 2014 (73)
	2015 - 2019 (145)
	2020 - 2024 (698)
	2025 - 2029 (51)

Enzyme Classification Name

	Hydrolases (304)
	Transferases (253)
	Translocases (24)
	Oxidoreductases (30)
	Lyases (12)
	Ligases (14)
	Isomerases (5)

Membrane Protein Annotation

	PDBTM (243)
	MemProtMD (148)
	mpstruc (105)
	OPM (87)

Symmetry Type

	Asymmetric (680)
	Cyclic (270)
	Dihedral (43)
	Icosahedral (10)
	Helical (6)
	Tetrahedral (2)
	Octahedral (1)

SCOP Classification

	All beta proteins (28)
	All alpha proteins (30)
	Alpha and beta proteins (a+b) (27)
	Alpha and beta proteins (a/b) (21)
	Multi-domain proteins (alpha and beta) (15)
	Artifacts (11)
	Membrane and cell surface proteins and peptides (3)
	Small proteins (5)

AllSelected

1 to 25 of 1,006 Structures

Page 1 of 41

Sort by

Explore in 3D

1CL4 \| pdb_00001cl4	Download File View File

NUCLEOCAPSID PROTEIN FROM MASON-PFIZER MONKEY VIRUS (MPMV)

Gao, Y., Kaluarachchi, K., Giedroc, D.P.

(1998) Protein Sci 7: 2265-2280

Released	1999-05-11
Method	SOLUTION NMR
Organisms	Mason-Pfizer monkey virus
Macromolecule	PROTEIN (GAG POLYPROTEIN) (protein)
Unique Ligands	ZN

Explore in 3D

1GH2 \| pdb_00001gh2	Download File View File

Crystal structure of the catalytic domain of a new human thioredoxin-like protein

Jin, J., Chen, X., Guo, Q., Yuan, J., Qiang, B., Rao, Z.

(2002) Eur J Biochem 269: 2060-2068

Released	2001-05-01
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Homo sapiens
Macromolecule	THIOREDOXIN-LIKE PROTEIN (protein)

Explore in 3D

1J48 \| pdb_00001j48	Download File View File

Crystal Structure of Apo-C1027

Chen, Y., Li, J., Liu, Y., Bartlam, M., Gao, Y., Jin, L., Tang, H., Shao, Y., Zhen, Y., Rao, Z.

To be published

Released	2003-06-03
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Streptomyces globisporus
Macromolecule	Apoprotein of C1027 (protein)

Explore in 3D

1K5W \| pdb_00001k5w	Download File View File

THREE-DIMENSIONAL STRUCTURE OF THE SYNAPTOTAGMIN 1 C2B-DOMAIN: SYNAPTOTAGMIN 1 AS A PHOSPHOLIPID BINDING MACHINE

Fernandez, I., Arac, D., Ubach, J., Gerber, S.H., Shin, O., Gao, Y., Anderson, R.G.W., Sudhof, T.C., Rizo, J.

(2001) Neuron 32: 1057-1069

Released	2002-01-23
Method	SOLUTION NMR
Organisms	Rattus norvegicus
Macromolecule	Synaptotagmin I (protein)
Unique Ligands	CA

Explore in 3D

1K6C \| pdb_00001k6c	Download File View File

LACK OF SYNERGY FOR INHIBITORS TARGETING A MULTI-DRUG RESISTANT HIV-1 PROTEASE

Schiffer, C.A.

(2002) Protein Sci 11: 418-429

Released	2002-02-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	ACT, MK1

Explore in 3D

1K6P \| pdb_00001k6p	Download File View File

LACK OF SYNERGY FOR INHIBITORS TARGETING A MULTI-DRUG RESISTANT HIV-1 PROTEASE

Schiffer, C.A.

(2002) Protein Sci 11: 418-429

Released	2002-02-06
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	ACT, XN3

Explore in 3D

1K6T \| pdb_00001k6t	Download File View File

LACK OF SYNERGY FOR INHIBITORS TARGETING A MULTI-DRUG RESISTANT HIV-1 PROTEASE

Schiffer, C.A.

(2002) Protein Sci 11: 418-429

Released	2002-02-06
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	ACT, XN1

Explore in 3D

1K6V \| pdb_00001k6v	Download File View File

LACK OF SYNERGY FOR INHIBITORS TARGETING A MULTI-DRUG RESISTANT HIV-1 PROTEASE

Schiffer, C.A.

(2002) Protein Sci 11: 418-429

Released	2002-02-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	POL polyprotein (protein)
Unique Ligands	ACT, XN2

Explore in 3D

1MT7 \| pdb_00001mt7	Download File View File

Viability of a drug-resistant HIV-1 protease mutant: structural insights for better antiviral therapy

Prabu-Jeyabalan, M., Nalivaika, E.A., King, N.M., Schiffer, C.A.

(2003) J Virol 77: 1305-1315

Released	2003-01-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Human immunodeficiency virus 1 Human immunodeficiency virus type 1
Macromolecule	PROTEASE RETROPEPSIN (protein) Substrate analogue (protein)
Unique Ligands	ACT

Explore in 3D

1MT8 \| pdb_00001mt8	Download File View File

Viability of a drug-resistant HIV-1 protease mutant: structural insights for better antiviral therapy

Prabu-Jeyabalan, M., Nalivaika, E.A., King, N.M., Schiffer, C.A.

(2003) J Virol 77: 1305-1315

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	HIV-1 CRF04_cpx Human immunodeficiency virus 1
Macromolecule	Capsid-p2 substrate peptide of HIV-1 Gag polyprotein (protein) PROTEASE RETROPEPSIN (protein)
Unique Ligands	ACT

Explore in 3D

1MT9 \| pdb_00001mt9	Download File View File

Viability of a drug-resistant HIV-1 protease mutant: structural insights for better antiviral therapy

Prabu-Jeyabalan, M., Nalivaika, E.A., King, N.M., Schiffer, C.A.

(2003) J Virol 77: 1305-1315

Released	2003-01-07
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	PROTEASE RETROPEPSIN (protein) p1-p6 Gag substrate decapeptide (protein)
Unique Ligands	PO4

Explore in 3D

1MTB \| pdb_00001mtb	Download File View File

Viability of a drug-resistant HIV-1 protease mutant: structural insights for better antiviral therapy

Prabu-Jeyabalan, M., Nalivaika, E.A., King, N.M., Schiffer, C.A.

(2003) J Virol 77: 1305-1315

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	PROTEASE RETROPEPSIN (protein)
Unique Ligands	ROC

Explore in 3D

1N49 \| pdb_00001n49	Download File View File

Viability of a Drug-Resistant HIV-1 Protease Variant: Structural Insights for Better Anti-Viral Therapy

Prabu-Jeyabalan, M., Nalivaika, E.A., King, N.M., Schiffer, C.A.

(2003) J Virol 77: 1306-1315

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	Protease (protein)
Unique Ligands	RIT

Explore in 3D

1PVD \| pdb_00001pvd	Download File View File

CRYSTAL STRUCTURE OF THE THIAMIN DIPHOSPHATE DEPENDENT ENZYME PYRUVATE DECARBOXYLASE FROM THE YEAST SACCHAROMYCES CEREVISIAE AT 2.3 ANGSTROMS RESOLUTION

Furey, W., Arjunan, P.

(1996) J Mol Biology 256: 590-600

Released	1995-07-31
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	PYRUVATE DECARBOXYLASE (protein)
Unique Ligands	MG, TPP

Explore in 3D

1U5Q \| pdb_00001u5q	Download File View File

Crystal Structure of the TAO2 Kinase Domain: Activation and Specifity of a Ste20p MAP3K

Zhou, T., Raman, M., Gao, Y., Earnest, S., Chen, Z., Machius, M., Cobb, M.H., Goldsmith, E.J.

(2004) Structure 12: 1891-1900

Released	2004-10-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	serine/threonine protein kinase TAO2 (protein)
Unique Ligands	CA

Explore in 3D

1U5R \| pdb_00001u5r	Download File View File

Crystal Structure of the TAO2 Kinase Domain: Activation and Specifity of a Ste20p MAP3K

Zhou, T., Raman, M., Gao, Y., Earnest, S., Chen, Z., Machius, M., Cobb, M.H., Goldsmith, E.J.

(2004) Structure 12: 1891-1900

Released	2004-10-12
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Rattus norvegicus
Macromolecule	serine/threonine protein kinase TAO2 (protein)
Unique Ligands	ATP, CA, MG

Explore in 3D

1YFC \| pdb_00001yfc	Download File View File

Solution nmr structure of a yeast iso-1-ferrocytochrome C

Baistrocchi, P., Banci, L., Bertini, I., Turano, P., Bren, K.L., Gray, H.B.

(1996) Biochemistry 35: 13788-13796

Released	1997-03-12
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	YEAST ISO-1-FERROCYTOCHROME C (protein)
Unique Ligands	HEC

Explore in 3D

1YIC \| pdb_00001yic	Download File View File

THE OXIDIZED SACCHAROMYCES CEREVISIAE ISO-1-CYTOCHROME C, NMR, 20 STRUCTURES

Banci, L., Bertini, I., Bren, K.L., Gray, H.B., Sompornpisut, P., Turano, P.

(1997) Biochemistry 36: 8992-9001

Released	1997-07-23
Method	SOLUTION NMR
Organisms	Saccharomyces cerevisiae
Macromolecule	CYTOCHROME C, ISO-1 (protein)
Unique Ligands	HEC

Explore in 3D

2DAP \| pdb_00002dap	Download File View File

C. GLUTAMICUM DAP DEHYDROGENASE IN COMPLEX WITH DAP

Scapin, G., Cirilli, M., Reddy, S.G., Gao, Y., Vederas, J.C., Blanchard, J.S.

(1998) Biochemistry 37: 3278-3285

Released	1998-04-08
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Corynebacterium glutamicum
Macromolecule	DIAMINOPIMELIC ACID DEHYDROGENASE (protein)
Unique Ligands	API

Explore in 3D

2DU9 \| pdb_00002du9	Download File View File

crystal structure of the transcriptional factor from C.glutamicum

Gao, Y., Yao, M., Tanaka, I.

(2007) Protein Sci 16: 1878-1886

Released	2007-07-24
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Corynebacterium glutamicum ATCC 13032
Macromolecule	Predicted transcriptional regulators (protein)
Unique Ligands	MPD

Explore in 3D

2F3B \| pdb_00002f3b	Download File View File

Mechanism of displacement of a catalytically essential loop from the active site of fructose-1,6-bisphosphatase

Iancu, C.V., Mukund, S., Choe, J.-Y., Fromm, H.J., Honzatko, R.B.

(2013) Biochemistry 52: 5206-5216

Released	2006-04-25
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Sus scrofa
Macromolecule	Fructose-1,6-bisphosphatase 1 (protein)
Unique Ligands	F6P, PO4, ZN

Explore in 3D

2F3D \| pdb_00002f3d	Download File View File

Mechanism of displacement of a catalytically essential loop from the active site of fructose-1,6-bisphosphatase

Iancu, C.V., Mukund, S., Choe, J.-Y., Fromm, H.J., Honzatko, R.B.

(2013) Biochemistry 52: 5206-5216

Released	2006-04-25
Method	X-RAY DIFFRACTION 1.83 Å
Organisms	Sus scrofa
Macromolecule	Fructose-1,6-bisphosphatase 1 (protein)
Unique Ligands	AMP, F6P, PO4, ZN

Explore in 3D

2GCD \| pdb_00002gcd	Download File View File

TAO2 kinase domain-staurosporine structure

Zhou, T., Sun, L., Gao, Y., Earnest, S., Cobb, M.H., Goldsmith, E.J.

(2006) Acta Biochim Biophys Sinica 38: 385-392

Released	2006-09-05
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Rattus norvegicus
Macromolecule	Serine/threonine-protein kinase TAO2 (protein)
Unique Ligands	STU

Explore in 3D

2HDZ \| pdb_00002hdz	Download File View File

Crystal Structure Analysis of the UBF HMG box5

Rong, H., Teng, M.K., Niu, L.W.

(2007) Acta Crystallogr D Biol Crystallogr 63: 730-737

Released	2007-06-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Homo sapiens
Macromolecule	Nucleolar transcription factor 1 (protein)

Explore in 3D

2ID5 \| pdb_00002id5	Download File View File

Crystal Structure of the Lingo-1 Ectodomain

Mosyak, L., Wood, A., Dwyer, B., Johnson, M., Stahl, M.L., Somers, W.S.

(2006) J Biological Chem 281: 36378-36390

Released	2006-09-26
Method	X-RAY DIFFRACTION 2.698 Å
Organisms	Homo sapiens
Macromolecule	Leucine rich repeat neuronal 6A (protein)
Unique Ligands	NAG
Unique branched monosaccharides	MAN, NAG

1 to 25 of 1,006 Structures

Page 1 of 41

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1CL4 | pdb_00001cl4

1GH2 | pdb_00001gh2

1J48 | pdb_00001j48

1K5W | pdb_00001k5w

1K6C | pdb_00001k6c

1K6P | pdb_00001k6p

1K6T | pdb_00001k6t

1K6V | pdb_00001k6v

1MT7 | pdb_00001mt7

1MT8 | pdb_00001mt8

1MT9 | pdb_00001mt9

1MTB | pdb_00001mtb

1N49 | pdb_00001n49

1PVD | pdb_00001pvd

1U5Q | pdb_00001u5q

1U5R | pdb_00001u5r

1YFC | pdb_00001yfc

1YIC | pdb_00001yic

2DAP | pdb_00002dap

2DU9 | pdb_00002du9

2F3B | pdb_00002f3b

2F3D | pdb_00002f3d

2GCD | pdb_00002gcd

2HDZ | pdb_00002hdz

2ID5 | pdb_00002id5