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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Ermler, U."

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Search Summary

This query matches 231 Structures.

Refinements

Structure Determination Methodology

experimental (231)

Scientific Name of Source Organism

	Methanocaldococcus jannaschii (18)
	Methanocaldococcus jannaschii DSM 2661 (16)
	Archaeoglobus fulgidus (15)
	Azotobacter vinelandii DJ (14)
	Methanopyrus kandleri (12)
	Geobacter metallireducens GS-15 (11)
	Azotobacter vinelandii (10)
	Methanothermobacter marburgensis str. Marburg (10)
	Archaeoglobus fulgidus DSM 4304 (7)
	Methylorubrum extorquens AM1 (7)

More...

Taxonomy

	Archaea (119)
	Bacteria (107)
	Eukaryota (6)

Experimental Method

	X-RAY DIFFRACTION (222)
	ELECTRON MICROSCOPY (9)

Polymer Entity Type

Protein (231)

Refinement Resolution (Å)

	1.0 - 1.5 (21)
	1.5 - 2.0 (90)
	2.0 - 2.5 (77)
	2.5 - 3.0 (34)
	3.0 - 3.5 (8)
	4.0 - 4.5 (1)

Release Date

	1995 - 1999 (5)
	2000 - 2004 (25)
	2005 - 2009 (34)
	2010 - 2014 (53)
	2015 - 2019 (79)
	2020 - 2024 (29)
	2025 - 2029 (6)

Enzyme Classification Name

	Oxidoreductases (94)
	Transferases (33)
	Translocases (9)
	Hydrolases (7)
	Ligases (1)
	Lyases (4)
	Isomerases (2)

Membrane Protein Annotation

	PDBTM (9)
	MemProtMD (7)
	mpstruc (5)
	OPM (2)

Symmetry Type

	Cyclic (145)
	Asymmetric (45)
	Dihedral (61)

SCOP Classification

	Alpha and beta proteins (a+b) (46)
	Alpha and beta proteins (a/b) (67)
	All alpha proteins (38)
	Multi-domain proteins (alpha and beta) (10)
	All beta proteins (11)
	Membrane and cell surface proteins and peptides (5)
	Artifacts (6)
	Small proteins (2)

AllSelected

1 to 25 of 231 Structures

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1AR1 \| pdb_00001ar1	Download File View File

Structure at 2.7 Angstrom Resolution of the Paracoccus Denitrificans two-subunit Cytochrome C Oxidase Complexed with an Antibody Fv Fragment

Ostermeier, C., Harrenga, A., Ermler, U., Michel, H.

(1997) Proc Natl Acad Sci U S A 94: 10547-10553

Released	1998-02-11
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus Paracoccus denitrificans
Macromolecule	ANTIBODY FV FRAGMENT (protein) CYTOCHROME C OXIDASE (protein)
Unique Ligands	CA, CU, HEA, LDA, MG

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1CQX \| pdb_00001cqx	Download File View File

Crystal structure of the flavohemoglobin from Alcaligenes eutrophus at 1.75 A resolution

Ermler, U., Siddiqui, R.A., Cramm, R., Friedrich, B.

(1995) EMBO J 14: 6067-6077

Released	1999-08-31
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Cupriavidus necator
Macromolecule	FLAVOHEMOPROTEIN (protein)
Unique Ligands	DGG, FAD, HEM, NA

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1D6R \| pdb_00001d6r	Download File View File

CRYSTAL STRUCTURE OF CANCER CHEMOPREVENTIVE BOWMAN-BIRK INHIBITOR IN TERNARY COMPLEX WITH BOVINE TRYPSIN AT 2.3 A RESOLUTION. STRUCTURAL BASIS OF JANUS-FACED SERINE PROTEASE INHIBITOR SPECIFICITY

Koepke, J., Ermler, U., Wenzl, G., Flecker, P.

(2000) J Mol Biology 298: 477-491

Released	2000-05-05
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Bos taurus Glycine max
Macromolecule	BOWMAN-BIRK PROTEINASE INHIBITOR PRECURSOR (protein) TRYPSINOGEN (protein)

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1E6V \| pdb_00001e6v	Download File View File

Methyl-coenzyme M reductase from Methanopyrus kandleri

Grabarse, W., Ermler, U.

(2000) J Mol Biology 303: 329

Released	2000-10-18
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Methanopyrus kandleri
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	COM, F43, TP7

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1E6Y \| pdb_00001e6y	Download File View File

Methyl-coenzyme M reductase from Methanosarcina barkeri

Grabarse, W., Ermler, U.

(2000) J Mol Biology 303: 329

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Methanosarcina barkeri
Macromolecule	METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE SUBUNIT ALPHA (protein) METHYL-COENZYME M REDUCTASE SUBUNIT GAMMA (protein)
Unique Ligands	COM, F43, GOL, TP7

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1EZW \| pdb_00001ezw	Download File View File

STRUCTURE OF COENZYME F420 DEPENDENT TETRAHYDROMETHANOPTERIN REDUCTASE FROM METHANOPYRUS KANDLERI

Shima, S., Warkentin, E., Grabarse, W., Thauer, R.K., Ermler, U.

(2000) J Mol Biology 300: 935-950

Released	2000-09-06
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Methanopyrus kandleri
Macromolecule	COENZYME F420-DEPENDENT N5,N10-METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE (protein)
Unique Ligands	CL, MG

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1F07 \| pdb_00001f07	Download File View File

STRUCTURE OF COENZYME F420 DEPENDENT TETRAHYDROMETHANOPTERIN REDUCTASE FROM METHANOBACTERIUM THERMOAUTOTROPHICUM

Shima, S., Warkentin, E., Grabarse, W., Thauer, R.K., Ermler, U.

(2000) J Mol Biology 300: 935-950

Released	2000-09-06
Method	X-RAY DIFFRACTION 2 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	COENZYME F420-DEPENDENT N5,N10-METHYLENETETRAHYDROMETHANOPTERIN REDUCTASE (protein)
Unique Ligands	CL, MPD, MPO

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1F6N \| pdb_00001f6n	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF THE MUTANT REACTION CENTER PRO L209-> TYR FROM THE PHOTOSYNTHETIC PURPLE BACTERIUM RHODOBACTER SPHAEROIDES

Kuglstatter, A., Ermler, U., Michel, H., Baciou, L., Fritzsch, G.

(2001) Biochemistry 40: 4253-4260

Released	2001-04-18
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Cereibacter sphaeroides
Macromolecule	REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCL, BPH, FE, LDA, PO4, SPO, U10

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1FNP \| pdb_00001fnp	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF THE MUTANT REACTION CENTER PRO L209-> PHE FROM THE PHOTOSYNTHETIC PURPLE BACTERIUM RHODOBACTER SPHAEROIDES

Kuglstatter, A., Ermler, U., Michel, H., Baciou, L., Fritzsch, G.

(2001) Biochemistry 40: 4253-4260

Released	2001-04-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Cereibacter sphaeroides
Macromolecule	REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCL, BPH, FE, LDA, PO4, SPO, U10

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1FNQ \| pdb_00001fnq	Download File View File

CRYSTAL STRUCTURE ANALYSIS OF THE MUTANT REACTION CENTER PRO L209-> GLU FROM THE PHOTOSYNTHETIC PURPLE BACTERIUM RHODOBACTER SPHAEROIDES

Kuglstatter, A., Ermler, U., Michel, H., Baciou, L., Fritzsch, G.

(2001) Biochemistry 40: 4253-4260

Released	2001-04-18
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Cereibacter sphaeroides
Macromolecule	REACTION CENTER PROTEIN H CHAIN (protein) REACTION CENTER PROTEIN L CHAIN (protein) REACTION CENTER PROTEIN M CHAIN (protein)
Unique Ligands	BCL, BPH, FE, LDA, PO4, SPO, U10

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1FTR \| pdb_00001ftr	Download File View File

FORMYLMETHANOFURAN:TETRAHYDROMETHANOPTERIN FORMYLTRANSFERASE FROM METHANOPYRUS KANDLERI

Ermler, U., Merckel, M.C., Thauer, R.K., Shima, S.

(1997) Structure 5: 635-646

Released	1998-10-14
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Methanopyrus kandleri
Macromolecule	FORMYLMETHANOFURAN\:TETRAHYDROMETHANOPTERIN FORMYLTRANSFERASE (protein)

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1HBM \| pdb_00001hbm	Download File View File

METHYL-COENZYME M REDUCTASE ENZYME PRODUCT COMPLEX

Ermler, U., Grabarse, W.

(2001) J Mol Biology 309: 315

Released	2001-08-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	CL, F43, GOL, MG, NA, SHT, ZN

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1HBN \| pdb_00001hbn	Download File View File

METHYL-COENZYME M REDUCTASE

Ermler, U., Grabarse, W.

(2001) J Mol Biology 309: 315

Released	2001-08-16
Method	X-RAY DIFFRACTION 1.16 Å
Organisms	Methanothermobacter thermautotrophicus
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	CL, COM, F43, GOL, MG, NA, TP7, ZN

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1HBU \| pdb_00001hbu	Download File View File

METHYL-COENZYME M REDUCTASE IN THE MCR-RED1-SILENT STATE IN COMPLEX with COENZYME M

Ermler, U., Grabarse, W.

(2001) J Mol Biology 309: 315

Released	2001-08-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methanothermobacter marburgensis str. Marburg
Macromolecule	METHYL-COENZYME M REDUCTASE I ALPHA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I BETA SUBUNIT (protein) METHYL-COENZYME M REDUCTASE I GAMMA SUBUNIT (protein)
Unique Ligands	CL, COM, F43, GOL, MG, NA, TP7, ZN

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1JAX \| pdb_00001jax	Download File View File

Structure of Coenzyme F420H2:NADP+ Oxidoreductase (FNO)

Warkentin, E., Mamat, B., Thauer, R., Ermler, U., Shima, S.

(2001) EMBO J 20: 6561-6569

Released	2001-12-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	conserved hypothetical protein (protein)
Unique Ligands	MG, NA

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1JAY \| pdb_00001jay	Download File View File

Structure of Coenzyme F420H2:NADP+ Oxidoreductase (FNO) with its substrates bound

Warkentin, E., Mamat, B., Thauer, R., Ermler, U., Shima, S.

(2001) EMBO J 20: 6561-6569

Released	2001-12-21
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	Coenzyme F420H2:NADP+ Oxidoreductase (FNO) (protein)
Unique Ligands	F42, NA, NAP

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1JNR \| pdb_00001jnr	Download File View File

Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6 resolution

Fritz, G., Roth, A., Schiffer, A., Buechert, T., Bourenkov, G., Bartunik, H.D., Huber, H., Stetter, K.O., Kroneck, P.M.H., Ermler, U.

(2002) Proc Natl Acad Sci U S A 99: 1836-1841

Released	2002-02-27
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Archaeoglobus fulgidus DSM 4304
Macromolecule	adenylylsulfate reductase (protein)
Unique Ligands	FAD, GOL, SF4

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1JNZ \| pdb_00001jnz	Download File View File

Structure of adenylylsulfate reductase from the hyperthermophilic Archaeoglobus fulgidus at 1.6 resolution

Fritz, G., Roth, A., Schiffer, A., Buechert, T., Bourenkov, G., Bartunik, H.D., Huber, H., Stetter, K.O., Kroneck, P.M., Ermler, U.

(2002) Proc Natl Acad Sci U S A 99: 1836-1841

Released	2002-03-27
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Archaeoglobus fulgidus DSM 4304
Macromolecule	adenylylsulfate reductase (protein)
Unique Ligands	FAD, SF4, SO3

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1K9B \| pdb_00001k9b	Download File View File

Crystal structure of the bifunctional soybean Bowman-Birk inhibitor at 0.28 nm resolution. Structural peculiarities in a folded protein conformation

Voss, R.H., Ermler, U., Essen, L.O., Wenzl, G., Kim, Y.M., Flecker, P.

(1996) Eur J Biochem 242: 122-131

Released	2001-11-16
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Glycine max
Macromolecule	BOWMAN-BIRK TYPE PROTEINASE INHIBITOR (protein)

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1LU9 \| pdb_00001lu9	Download File View File

Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1

Ermler, U., Hagemeier, C.H., Roth, A., Demmer, U., Grabarse, W., Warkentin, E., Vorholt, J.A.

(2002) Structure 10: 1127-1137

Released	2002-09-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methylorubrum extorquens AM1
Macromolecule	Methylene Tetrahydromethanopterin Dehydrogenase (protein)

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1LUA \| pdb_00001lua	Download File View File

Structure of methylene-tetrahydromethanopterin dehydrogenase from Methylobacterium extorquens AM1 complexed with NADP

Ermler, U., Hagemeier, C.H., Roth, A., Demmer, U., Grabarse, W., Warkentin, E., Vorholt, J.A.

(2002) Structure 10: 1127-1137

Released	2002-09-11
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Methylorubrum extorquens AM1
Macromolecule	Methylene Tetrahydromethanopterin Dehydrogenase (protein)
Unique Ligands	NAP

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1M5H \| pdb_00001m5h	Download File View File

Formylmethanofuran:tetrahydromethanopterin formyltransferase from Archaeoglobus fulgidus

Mamat, B., Roth, A., Grimm, C., Ermler, U., Tziatzios, C., Schubert, D., Thauer, R.K., Shima, S.

(2002) Protein Sci 11: 2168-2178

Released	2002-07-26
Method	X-RAY DIFFRACTION 2 Å
Organisms	Archaeoglobus fulgidus
Macromolecule	Formylmethanofuran--tetrahydromethanopterin formyltransferase (protein)
Unique Ligands	K

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1M5S \| pdb_00001m5s	Download File View File

Formylmethanofuran:tetrahydromethanopterin fromyltransferase from Methanosarcina barkeri

Mamat, B., Roth, A., Grimm, C., Ermler, U., Tziatzios, C., Schubert, D., Thauer, R.K., Shima, S.

(2002) Protein Sci 11: 2168-2178

Released	2002-07-26
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Methanosarcina barkeri
Macromolecule	Formylmethanofuran--tetrahydromethanopterin formyltransferase (protein)

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1MRO \| pdb_00001mro	Download File View File

METHYL-COENZYME M REDUCTASE

Ermler, U., Grabarse, W.

(1997) Science 278: 1457-1462

Released	1998-11-11
Method	X-RAY DIFFRACTION 1.16 Å
Organisms	Methanothermobacter marburgensis str. Marburg
Macromolecule	METHYL-COENZYME M REDUCTASE (protein)
Unique Ligands	COM, F43, GOL, NA, TP7, ZN

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1PCR \| pdb_00001pcr	Download File View File

STRUCTURE OF THE PHOTOSYNTHETIC REACTION CENTRE FROM RHODOBACTER SPHAEROIDES AT 2.65 ANGSTROMS RESOLUTION: COFACTORS AND PROTEIN-COFACTOR INTERACTIONS

Ermler, U., Fritzsch, G., Michel, H.

(1994) Structure 2: 925-936

Released	1995-02-07
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Cereibacter sphaeroides
Macromolecule	PHOTOSYNTHETIC REACTION CENTER (protein)
Unique Ligands	BCL, BPH, FE, LDA, PO4, SPO, U10

1 to 25 of 231 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1AR1 | pdb_00001ar1

1CQX | pdb_00001cqx

1D6R | pdb_00001d6r

1E6V | pdb_00001e6v

1E6Y | pdb_00001e6y

1EZW | pdb_00001ezw

1F07 | pdb_00001f07

1F6N | pdb_00001f6n

1FNP | pdb_00001fnp

1FNQ | pdb_00001fnq

1FTR | pdb_00001ftr

1HBM | pdb_00001hbm

1HBN | pdb_00001hbn

1HBU | pdb_00001hbu

1JAX | pdb_00001jax

1JAY | pdb_00001jay

1JNR | pdb_00001jnr

1JNZ | pdb_00001jnz

1K9B | pdb_00001k9b

1LU9 | pdb_00001lu9

1LUA | pdb_00001lua

1M5H | pdb_00001m5h

1M5S | pdb_00001m5s

1MRO | pdb_00001mro

1PCR | pdb_00001pcr