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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Day, A.J."

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Search Summary

This query matches 15 Structures.

Refinements

Structure Determination Methodology

experimental (15)

Scientific Name of Source Organism

	Homo sapiens (12)
	Mus musculus (3)
	Alphapolyomavirus mauratus (2)

Taxonomy

	Eukaryota (15)
	Monodnaviria (2)

Experimental Method

	X-RAY DIFFRACTION (9)
	SOLUTION NMR (5)
	SOLUTION SCATTERING (1)

Polymer Entity Type

Protein (15)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (1)
	2.0 - 2.5 (5)
	2.5 - 3.0 (1)

Release Date

	1995 - 1999 (2)
	2000 - 2004 (3)
	2005 - 2009 (7)
	2010 - 2014 (1)
	2015 - 2019 (2)

Enzyme Classification Name

	Hydrolases (4)
	Transferases (2)

Symmetry Type

Asymmetric (15)

SCOP Classification

Alpha and beta proteins (a+b) (9)

AllSelected

1 to 15 of 15 Structures

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1AOT \| pdb_00001aot	Download File View File

NMR STRUCTURE OF THE FYN SH2 DOMAIN COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE, MINIMIZED AVERAGE STRUCTURE

Mulhern, T.D., Shaw, G.L., Morton, C.J., Day, A.J., Campbell, I.D.

(1997) Structure 5: 1313-1323

Released	1998-01-14
Method	SOLUTION NMR
Organisms	Alphapolyomavirus mauratus Homo sapiens
Macromolecule	FYN PROTEIN-TYROSINE KINASE (protein) PHOSPHOTYROSYL PEPTIDE (protein)

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1AOU \| pdb_00001aou	Download File View File

NMR STRUCTURE OF THE FYN SH2 DOMAIN COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE, 22 STRUCTURES

Mulhern, T.D., Shaw, G.L., Morton, C.J., Day, A.J., Campbell, I.D.

(1997) Structure 5: 1313-1323

Released	1998-01-14
Method	SOLUTION NMR
Organisms	Alphapolyomavirus mauratus Homo sapiens
Macromolecule	FYN PROTEIN-TYROSINE KINASE (protein) PHOSPHOTYROSYL PEPTIDE (protein)

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1O7B \| pdb_00001o7b	Download File View File

Refined solution structure of the human TSG-6 Link module

Blundell, C.D., Teriete, P., Kahmann, J.D., Pickford, A.R., Campbell, I.D., Day, A.J.

(2003) J Biological Chem 278: 49261-49270

Released	2003-10-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	TUMOR NECROSIS FACTOR-INDUCIBLE PROTEIN TSG-6 (protein)

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1O7C \| pdb_00001o7c	Download File View File

Solution structure of the human TSG-6 Link module in the presence of a hyaluronan octasaccharide

Blundell, C.D., Teriete, P., Kahmann, J.D., Pickford, A.R., Campbell, I.D., Day, A.J.

(2003) J Biological Chem 278: 49261-49270

Released	2003-10-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	TUMOR NECROSIS FACTOR-INDUCIBLE PROTEIN TSG-6 (protein)

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1POZ \| pdb_00001poz	Download File View File

SOLUTION STRUCTURE OF THE HYALURONAN BINDING DOMAIN OF HUMAN CD44

Teriete, P., Banerji, S., Blundell, C.D., Kahmann, J.D., Pickford, A.R., Wright, A.J., Campbell, I.D., Jackson, D.G., Day, A.J.

(2004) Mol Cell 13: 483-496

Released	2004-03-16
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	CD44 antigen (protein)

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2IC4 \| pdb_00002ic4	Download File View File

Solution structure of the His402 allotype of the Factor H SCR6-SCR7-SCR8 fragment

Fernando, A.N., Furtado, P.B., Gilbert, H.E., Clark, S.J., Day, A.J., Sim, R.B., Perkins, S.J.

(2007) J Mol Biology 368: 564-581

Released	2007-04-10
Method	SOLUTION SCATTERING
Organisms	Homo sapiens
Macromolecule	Complement factor H (protein)

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2JCP \| pdb_00002jcp	Download File View File

The hyaluronan binding domain of murine CD44

Banerji, S., Wright, A.J., Noble, M.E.M., Mahoney, D.J., Campbell, I.D., Day, A.J., Jackson, D.G.

(2008) Nat Struct Mol Biol 14: 234

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.3 Å
Organisms	Mus musculus
Macromolecule	CD44 ANTIGEN (protein)

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2JCQ \| pdb_00002jcq	Download File View File

The hyaluronan binding domain of murine CD44 in a Type A complex with an HA 8-mer

Banerji, S., Wright, A.J., Noble, M.E.M., Mahoney, D.J., Campbell, I.D., Day, A.J., Jackson, D.G.

(2008) Nat Struct Mol Biol 14: 234

Released	2007-01-30
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Mus musculus
Macromolecule	CD44 ANTIGEN (protein)
Unique Ligands	GOL
Unique branched monosaccharides	BDP, NAG

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2JCR \| pdb_00002jcr	Download File View File

The hyaluronan binding domain of murine CD44 in a Type B complex with an HA 8-mer

Banerji, S., Wright, A.J., Noble, M.E.M., Mahoney, D.J., Campbell, I.D., Day, A.J., Jackson, D.G.

(2008) Nat Struct Mol Biol 14: 234

Released	2007-01-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	CD44 ANTIGEN (protein)
Unique Ligands	GOL
Unique branched monosaccharides	BDP, NAG

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2PF5 \| pdb_00002pf5	Download File View File

Crystal Structure of the Human TSG-6 Link Module

Higman, V.A., Mahoney, D.J., Noble, M.E.M., Day, A.J.

(2007) J Mol Biology 371: 669-684

Released	2007-06-26
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Tumor necrosis factor-inducible protein TSG-6 (protein)
Unique Ligands	2PE, SO4

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2UWN \| pdb_00002uwn	Download File View File

Crystal structure of Human Complement Factor H, SCR domains 6-8 (H402 risk variant), in complex with ligand.

Prosser, B.E., Johnson, S., Roversi, P., Herbert, A.P., Blaum, B.S., Tyrrell, J., Jowitt, T.A., Clark, S.J., Terelli, E., Uhrin, D., Barlow, P.N., Sim, R.B., Day, A.J., Lea, S.M.

(2007) J Exp Medicine 204: 2277

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Homo sapiens
Macromolecule	HUMAN COMPLEMENT FACTOR H (protein)
Unique Ligands	ACT, CL, SO4
Unique branched monosaccharides	GU4, YYJ

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2V8E \| pdb_00002v8e	Download File View File

Crystal structure of Human Complement Factor H, SCR domains 6-8 (H402 risk variant), in complex with ligand.

Prosser, B.E., Johnson, S., Roversi, P., Herbert, A.P., Blaum, B.S., Tyrrell, J., Jowitt, T.A., Clark, S.J., Tarelli, E., Uhrin, D., Barlow, P.N., Sim, R.B., Day, A.J., Lea, S.M.

(2007) J Exp Medicine 204: 2277

Released	2007-10-02
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	COMPLEMENT FACTOR H (protein)
Unique Ligands	CL, GOL, SO4
Unique branched monosaccharides	GU4, YYJ

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2WNO \| pdb_00002wno	Download File View File

X-ray Structure of CUB_C domain from TSG-6

Briggs, D.C., Day, A.J.

(2015) J Biological Chem 290: 28708

Released	2010-09-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	TUMOR NECROSIS FACTOR-INDUCIBLE GENE 6 PROTEIN (protein)
Unique Ligands	CA, CO

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6FPY \| pdb_00006fpy	Download File View File

Inter-alpha-inhibitor heavy chain 1, wild type

Briggs, D.C., Day, A.J.

(2020) J Biological Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 2.339 Å
Organisms	Homo sapiens
Macromolecule	Inter-alpha-trypsin inhibitor heavy chain H1 (protein)
Unique Ligands	GOL, MG

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6FPZ \| pdb_00006fpz	Download File View File

Inter-alpha-inhibitor heavy chain 1, D298A

Briggs, D.C., Day, A.J.

(2020) J Biological Chem

Released	2019-02-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Homo sapiens
Macromolecule	Inter-alpha-trypsin inhibitor heavy chain H1 (protein)
Unique Ligands	ACT, GOL

1 to 15 of 15 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1AOT | pdb_00001aot

NMR STRUCTURE OF THE FYN SH2 DOMAIN COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE, MINIMIZED AVERAGE STRUCTURE

1AOU | pdb_00001aou

NMR STRUCTURE OF THE FYN SH2 DOMAIN COMPLEXED WITH A PHOSPHOTYROSYL PEPTIDE, 22 STRUCTURES

1O7B | pdb_00001o7b

Refined solution structure of the human TSG-6 Link module

1O7C | pdb_00001o7c

Solution structure of the human TSG-6 Link module in the presence of a hyaluronan octasaccharide

1POZ | pdb_00001poz

SOLUTION STRUCTURE OF THE HYALURONAN BINDING DOMAIN OF HUMAN CD44

2IC4 | pdb_00002ic4

Solution structure of the His402 allotype of the Factor H SCR6-SCR7-SCR8 fragment

2JCP | pdb_00002jcp

The hyaluronan binding domain of murine CD44

2JCQ | pdb_00002jcq

The hyaluronan binding domain of murine CD44 in a Type A complex with an HA 8-mer

2JCR | pdb_00002jcr

The hyaluronan binding domain of murine CD44 in a Type B complex with an HA 8-mer

2PF5 | pdb_00002pf5

Crystal Structure of the Human TSG-6 Link Module

2UWN | pdb_00002uwn

Crystal structure of Human Complement Factor H, SCR domains 6-8 (H402 risk variant), in complex with ligand.

2V8E | pdb_00002v8e

Crystal structure of Human Complement Factor H, SCR domains 6-8 (H402 risk variant), in complex with ligand.

2WNO | pdb_00002wno

X-ray Structure of CUB_C domain from TSG-6

6FPY | pdb_00006fpy

Inter-alpha-inhibitor heavy chain 1, wild type

6FPZ | pdb_00006fpz

Inter-alpha-inhibitor heavy chain 1, D298A

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AOT | pdb_00001aot

1AOU | pdb_00001aou

1O7B | pdb_00001o7b

1O7C | pdb_00001o7c

1POZ | pdb_00001poz

2IC4 | pdb_00002ic4

2JCP | pdb_00002jcp

2JCQ | pdb_00002jcq

2JCR | pdb_00002jcr

2PF5 | pdb_00002pf5

2UWN | pdb_00002uwn

2V8E | pdb_00002v8e

2WNO | pdb_00002wno

6FPY | pdb_00006fpy

6FPZ | pdb_00006fpz