SPD: SPERMIDINE
SPD is a Ligand Of Interest in 6XXK designated by the Author
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
6XXK_SPD_A_401 | 83% | 92% | 0.08 | 0.938 | 0.32 | 0.22 | - | - | 1 | 0 | 100% | 1 |
6XXK_SPD_B_401 | 66% | 91% | 0.131 | 0.936 | 0.36 | 0.23 | - | - | 3 | 0 | 100% | 1 |
8A0F_SPD_A_401 | 64% | 68% | 0.126 | 0.925 | 0.41 | 0.81 | - | - | 2 | 0 | 100% | 1 |
7A6T_SPD_B_1602 | 61% | 92% | 0.156 | 0.945 | 0.19 | 0.32 | - | - | 8 | 0 | 100% | 1 |
6XXJ_SPD_A_401 | 51% | 76% | 0.148 | 0.902 | 0.43 | 0.53 | - | - | 9 | 0 | 100% | 1 |
8A0G_SPD_B_401 | 48% | 94% | 0.181 | 0.926 | 0.11 | 0.32 | - | - | 6 | 0 | 100% | 0.65 |
4C0Z_SPD_A_1223 | 95% | 63% | 0.064 | 0.966 | 0.7 | 0.73 | - | - | 3 | 0 | 100% | 1 |
7XJM_SPD_B_401 | 90% | 91% | 0.078 | 0.961 | 0.25 | 0.33 | - | - | 0 | 0 | 100% | 1 |
3C6K_SPD_C_501 | 86% | 54% | 0.094 | 0.964 | 0.42 | 1.34 | - | 1 | 0 | 0 | 100% | 1 |