Ligand validation:5BPQ

NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 5BPQ designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5BPQ_NAG_B_201	23%	36%	0.241	0.862	0.57	1.93	-	5	0	0	100%	0.9333
5BPQ_NAG_A_201	15%	54%	0.289	0.853	0.68	1.09	-	2	0	0	100%	0.9333
5BPQ_NAG_C_201	11%	37%	0.352	0.877	0.62	1.8	-	5	0	0	100%	0.9333
5BPQ_NAG_D_201	11%	18%	0.338	0.856	0.76	2.68	-	7	1	1	100%	0.9333
5CM4_NAG_A_301	34%	54%	0.136	0.817	0.58	1.18	-	1	0	0	100%	0.9333
5BPB_NAG_B_201	33%	38%	0.218	0.895	0.49	1.88	-	4	0	0	100%	0.9333
5BQE_NAG_C_201	24%	31%	0.242	0.869	0.96	1.78	1	4	0	0	100%	0.9333
5CL1_NAG_C_201	16%	63%	0.208	0.788	0.46	0.95	-	2	0	0	93%	0.9333
5UWG_NAG_A_202	15%	73%	0.227	0.787	0.51	0.53	-	-	0	0	100%	0.9333
3H0C_NAG_A_794	100%	56%	0.021	0.995	0.61	1.08	-	1	0	0	100%	0.9333
5LDS_NAG_B_1007	100%	67%	0.022	0.995	0.48	0.79	-	-	0	0	100%	0.9333
6MUG_NAG_G_629	100%	76%	0.022	0.994	0.35	0.58	-	-	0	0	100%	0.9333
5O5D_NAG_A_601	100%	65%	0.022	0.994	0.32	0.99	-	1	0	0	100%	0.9333
3GXM_NAG_A_498	100%	45%	0.026	0.992	0.75	1.34	-	2	0	0	100%	0.9333

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.