3TDK
NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE
NAD is a Ligand Of Interest in 3TDK designated by the RCSB
Best-fitted instance in this entry | |
Other instances in this entry |
Best-fitted instance in this entry | |
Best-fitted PDB instances with same target (top 5) |
Best-fitted instance in this entry | |
Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
---|---|---|---|---|---|---|---|---|---|---|---|---|
3TDK_NAD_H_500 | 52% | 32% | 0.172 | 0.969 | 1.2 | 1.49 | 3 | 8 | 1 | 0 | 80% | 0.7955 |
3TDK_NAD_A_500 | 46% | 24% | 0.192 | 0.966 | 1.32 | 1.79 | 5 | 8 | 4 | 0 | 80% | 0.7955 |
3TDK_NAD_L_500 | 45% | 29% | 0.188 | 0.956 | 1.34 | 1.48 | 2 | 3 | 5 | 0 | 80% | 0.7955 |
3TDK_NAD_B_500 | 44% | 30% | 0.185 | 0.951 | 1.35 | 1.42 | 3 | 4 | 0 | 0 | 80% | 0.7955 |
3TDK_NAD_F_500 | 43% | 31% | 0.179 | 0.941 | 1.14 | 1.61 | 3 | 6 | 3 | 0 | 80% | 0.7955 |
3TDK_NAD_C_500 | 40% | 30% | 0.196 | 0.943 | 1.18 | 1.62 | 3 | 6 | 2 | 0 | 80% | 0.7955 |
3TDK_NAD_G_500 | 38% | 24% | 0.209 | 0.947 | 1.4 | 1.71 | 5 | 6 | 4 | 0 | 80% | 0.7955 |
3TDK_NAD_I_500 | 28% | 24% | 0.233 | 0.924 | 1.54 | 1.6 | 4 | 7 | 1 | 0 | 80% | 0.7955 |
3TDK_NAD_D_500 | 14% | 27% | 0.305 | 0.897 | 1.45 | 1.51 | 3 | 1 | 7 | 0 | 80% | 0.7955 |
3TDK_NAD_J_500 | 9% | 24% | 0.357 | 0.88 | 1.35 | 1.75 | 2 | 7 | 3 | 0 | 80% | 0.7955 |
3TDK_NAD_K_500 | 6% | 24% | 0.378 | 0.856 | 1.68 | 1.46 | 6 | 5 | 4 | 0 | 80% | 0.7955 |
3TDK_NAD_E_500 | 5% | 23% | 0.403 | 0.841 | 1.51 | 1.69 | 4 | 8 | 7 | 0 | 80% | 0.7955 |
2QG4_NAD_D_500 | 99% | 27% | 0.06 | 0.988 | 1.71 | 1.22 | 4 | 4 | 0 | 0 | 100% | 1 |
6C4J_NAD_F_501 | 73% | 20% | 0.15 | 0.979 | 1.74 | 1.62 | 7 | 4 | 1 | 0 | 100% | 1 |
3PTZ_NAD_A_500 | 70% | 5% | 0.154 | 0.974 | 2.58 | 2.7 | 8 | 16 | 12 | 0 | 100% | 1 |
3CMC_NAD_R_408 | 100% | 20% | 0.016 | 0.998 | 1.63 | 1.74 | 4 | 9 | 0 | 0 | 100% | 1 |
4RQU_NAD_B_403 | 100% | 3% | 0.019 | 0.997 | 3.51 | 2.61 | 13 | 18 | 0 | 0 | 100% | 1 |
3EC7_NAD_A_400 | 100% | 18% | 0.025 | 0.995 | 1.8 | 1.74 | 5 | 8 | 1 | 0 | 100% | 1 |
4URF_NAD_A_1249 | 100% | 44% | 0.034 | 0.995 | 0.96 | 1.2 | 2 | 4 | 0 | 0 | 100% | 1 |
2C5A_NAD_B_1374 | 100% | 23% | 0.039 | 0.992 | 1.34 | 1.84 | 6 | 7 | 1 | 0 | 100% | 1 |