PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 1RV3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
1RV3_PLP_B_600 | 53% | 1% | 0.178 | 0.939 | 4.91 | 2.72 | 10 | 7 | 1 | 0 | 100% | 0.9375 |
1RV3_PLP_A_500 | 52% | 1% | 0.186 | 0.944 | 4.76 | 2.78 | 10 | 8 | 1 | 0 | 100% | 0.9375 |
1CJ0_PLP_B_2291 | 85% | 7% | 0.113 | 0.978 | 1.96 | 2.77 | 5 | 9 | 1 | 0 | 100% | 0.9375 |
1LS3_PLP_A_419 | 84% | 11% | 0.118 | 0.979 | 1.58 | 2.54 | 3 | 8 | 0 | 0 | 100% | 0.9375 |
1RVU_PLP_A_500 | 67% | 1% | 0.153 | 0.962 | 4.93 | 2.96 | 10 | 8 | 0 | 0 | 100% | 0.9375 |
1RVY_PLP_B_600 | 58% | 1% | 0.172 | 0.95 | 4.66 | 2.9 | 10 | 9 | 1 | 0 | 100% | 0.9375 |
1RV4_PLP_A_500 | 53% | 1% | 0.2 | 0.963 | 4.76 | 2.96 | 10 | 6 | 0 | 0 | 100% | 0.9375 |
9J0V_PLP_A_301 | 100% | 36% | 0.037 | 0.987 | 0.82 | 1.68 | - | 5 | 0 | 0 | 100% | 0.9375 |
2BIE_PLP_B_1361 | 100% | 28% | 0.039 | 0.989 | 1.48 | 1.39 | 4 | 3 | 1 | 0 | 100% | 0.9375 |
4NOG_PLP_A_501 | 100% | 38% | 0.042 | 0.992 | 1.24 | 1.18 | 3 | 1 | 0 | 0 | 100% | 1 |
3WQC_PLP_B_402 | 100% | 21% | 0.045 | 0.993 | 1.96 | 1.38 | 4 | 4 | 0 | 0 | 100% | 0.9375 |
4HT3_PLP_B_401 | 100% | 15% | 0.045 | 0.993 | 2.04 | 1.72 | 3 | 5 | 0 | 0 | 100% | 0.9375 |