cryo-EM structure of DEPTOR bound to human mTOR complex 1, focussed on one protomer
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth C] | ANAPC4_WD40_9 | e7pebC1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 8-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
D [auth I] | PDZ | e7pebI1 | A: beta barrels | X: PDZ domain (From Topology) | H: PDZ domain (From Topology) | T: PDZ domain | F: PDZ | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02260 | FATC domain (FATC) | FATC domain | - | Family | |
PF08771 | FKBP12-rapamycin binding domain (FRB_dom) | FKBP12-rapamycin binding domain | The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ... | Domain | |
PF00454 | Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase) | Phosphatidylinositol 3- and 4-kinase | - | Family | |
PF11865 | Serine/threonine-protein kinase mTOR domain (mTOR_dom) | Serine/threonine-protein kinase mTOR domain | - | Repeat | |
PF02259 | FAT domain (FAT) | FAT domain | - | Repeat | |
B [auth C] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
C [auth E] | PF14538 | Raptor N-terminal CASPase like domain (Raptor_N) | Raptor N-terminal CASPase like domain | This domain is found at the N-terminus of the Raptor protein. It has been identified to have a CASPase like structure [1]. It conserves the characteristic cys/his dyad of the caspases suggesting it may have a peptidase activity. | Domain |
C [auth E] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
C [auth E] | PF02985 | HEAT repeat (HEAT) | HEAT repeat | - | Repeat |