6KYH
Crystal structure of Shank3 NTD-ANK A42K mutant in complex with HRas
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E [auth F] | SCOP2 Family | Ras-like monodomain GTPases | 8099747 | 4004043 | SCOP2 (2022-06-29) |
E [auth F] | SCOP2 Superfamily | Ras-like P-loop GTPases | 8099748 | 3002022 | SCOP2 (2022-06-29) |
F [auth G] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8099748 | 3002022 | SCOP2B (2022-06-29) |
H [auth E] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8099748 | 3002022 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8099748 | 3002022 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ank_2,FERM_f0 | e6kyhA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2,FERM_f0 | ECOD (1.6) |
C | Ank_2,FERM_f0 | e6kyhC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2,FERM_f0 | ECOD (1.6) |
D | Ank_2,FERM_f0 | e6kyhD1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2,FERM_f0 | ECOD (1.6) |
B | Ank_2,FERM_f0 | e6kyhB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: Ankyrin repeat (From Topology) | T: Ankyrin repeat | F: Ank_2,FERM_f0 | ECOD (1.6) |
E [auth F] | Ras | e6kyhF1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
F [auth G] | Ras | e6kyhG1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
H [auth E] | Ras | e6kyhE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
G [auth H] | Ras | e6kyhH1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: Ras | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
E [auth F] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
F [auth G] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
H [auth E] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
G [auth H] | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF12796 | Ankyrin repeats (3 copies) (Ank_2) | Ankyrin repeats (3 copies) | - | Repeat | |
E [auth F], F [auth G], G [auth H], H [auth E] | PF00071 | Ras family (Ras) | Ras family | Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motili ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036028 | SH3-like domain superfamily | Homologous Superfamily | |
IPR002110 | Ankyrin repeat | Repeat | |
IPR001452 | SH3 domain | Domain | |
IPR051569 | SH3 and multiple ankyrin repeat domains protein | Family | |
IPR001660 | Sterile alpha motif domain | Domain | |
IPR036770 | Ankyrin repeat-containing domain superfamily | Homologous Superfamily | |
IPR013761 | Sterile alpha motif/pointed domain superfamily | Homologous Superfamily | |
IPR041489 | PDZ domain 6 | Domain | |
IPR036034 | PDZ superfamily | Homologous Superfamily | |
IPR001478 | PDZ domain | Domain | |
E [auth F], F [auth G], G [auth H], H [auth E] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
E [auth F], F [auth G], G [auth H], H [auth E] | IPR020849 | Small GTPase, Ras-type | Family |
E [auth F], F [auth G], G [auth H], H [auth E] | IPR005225 | Small GTP-binding domain | Domain |
E [auth F], F [auth G], G [auth H], H [auth E] | IPR001806 | Small GTPase | Family |