5NFG
Structure of recombinant cardosin B from Cynara cardunculus
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Asp_C | e5nfgA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_C | ECOD (1.6) |
A | Asp_N | e5nfgA1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_N | ECOD (1.6) |
B | Asp_C | e5nfgB1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_C | ECOD (1.6) |
B | Asp_N | e5nfgB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
B | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00026 | Eukaryotic aspartyl protease (Asp) | Eukaryotic aspartyl protease | Aspartyl (acid) proteases include pepsins, cathepsins, and renins. Two-domain structure, probably arising from ancestral duplication. This family does not include the retroviral nor retrotransposon proteases (Pfam:PF00077), which are much smaller a ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Procardosin-B,Procardosin-B |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033869 | Phytepsin | Domain | |
IPR011001 | Saposin-like | Homologous Superfamily | |
IPR007856 | Saposin-like type B, region 1 | Domain | |
IPR008139 | Saposin B type domain | Domain | |
IPR001461 | Aspartic peptidase A1 | Family | |
IPR033121 | Peptidase family A1 domain | Domain | |
IPR008138 | Saposin B type, region 2 | Domain | |
IPR021109 | Aspartic peptidase domain superfamily | Homologous Superfamily | |
IPR001969 | Aspartic peptidase, active site | Active Site |