Cryo-EM structure of mTORC1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
D [auth a] | SCOP2B Superfamily | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) | 8036936 | 3001600 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | KOG1517 | e5h64B3 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: KOG1517 | ECOD (1.6) |
B | KOG0213 | e5h64B2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: KOG0213 | ECOD (1.6) |
B | Raptor_N | e5h64B1 | A: a/b three-layered sandwiches | X: Caspase-like (From Topology) | H: Caspase-like (From Topology) | T: Caspase-like | F: Raptor_N | ECOD (1.6) |
E [auth b] | KOG1517 | e5h64b3 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: KOG1517 | ECOD (1.6) |
E [auth b] | KOG0213 | e5h64b2 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: KOG0213 | ECOD (1.6) |
E [auth b] | Raptor_N | e5h64b1 | A: a/b three-layered sandwiches | X: Caspase-like (From Topology) | H: Caspase-like (From Topology) | T: Caspase-like | F: Raptor_N | ECOD (1.6) |
C | ANAPC4_WD40_9 | e5h64C1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
F [auth c] | ANAPC4_WD40_9 | e5h64c1 | A: beta duplicates or obligate multimers | X: beta-propeller-like | H: beta-propeller | T: 7-bladed | F: ANAPC4_WD40_9 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, D [auth a] | PF02260 | FATC domain (FATC) | FATC domain | - | Family |
A, D [auth a] | PF08771 | FKBP12-rapamycin binding domain (FRB_dom) | FKBP12-rapamycin binding domain | The macrolide antibiotic rapamycin and the cytosol protein FKBP12 can form a complex which specifically inhibits the TORC1 complex, leading to growth arrest. The FKBP12-rapamycin complex interferes with TORC1 function by binding to the FKBP12-rapa ... | Domain |
A, D [auth a] | PF00454 | Phosphatidylinositol 3- and 4-kinase (PI3_PI4_kinase) | Phosphatidylinositol 3- and 4-kinase | - | Family |
A, D [auth a] | PF11865 | Serine/threonine-protein kinase mTOR domain (mTOR_dom) | Serine/threonine-protein kinase mTOR domain | - | Repeat |
A, D [auth a] | PF02259 | FAT domain (FAT) | FAT domain | - | Repeat |
B, E [auth b] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
B, E [auth b] | PF02985 | HEAT repeat (HEAT) | HEAT repeat | - | Repeat |
C, F [auth c] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |