3ZYS | pdb_00003zys

Human dynamin 1 deltaPRD polymer stabilized with GMPPCP


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRas-like P-loop GTPases 8058465 3002022 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyDynamin stalk-like 8054370 3002023 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyPH domain-like 8058467 3000134 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyPH domain-like 8058467 3000134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ADynamin_Ne3zysA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Dynamin_NECOD (1.6)
DDynamin_Ne3zysD1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: Dynamin_NECOD (1.6)
BDynamin_Me3zysB2 A: alpha bundlesX: Middle and GTPase effector domains in dynamin-related proteins (From Topology)H: Middle and GTPase effector domains in dynamin-related proteins (From Topology)T: Middle and GTPase effector domains in dynamin-related proteinsF: Dynamin_MECOD (1.6)
EDynamin_Me3zysE1 A: alpha bundlesX: Middle and GTPase effector domains in dynamin-related proteins (From Topology)H: Middle and GTPase effector domains in dynamin-related proteins (From Topology)T: Middle and GTPase effector domains in dynamin-related proteinsF: Dynamin_MECOD (1.6)
CPHe3zysC1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: PHECOD (1.6)
FPHe3zysF1 A: beta barrelsX: PH domain-likeH: PH domain-like (From Topology)T: PH domain-likeF: PHECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D
PF01031Dynamin central region (Dynamin_M)Dynamin central region- Family
A, D
PF00350Dynamin family (Dynamin_N)Dynamin familyDomain
C, F
PF00169PH domain (PH)PH domainPH stands for pleckstrin homology. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, D
DYNAMIN-1
B, E
INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
C, F
DYNAMIN-1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, D
IPR020850GTPase effector domainDomain
A, D
IPR001849Pleckstrin homology domainDomain
A, D
IPR001401Dynamin, GTPase domainDomain
A, D
IPR045063Dynamin, N-terminalDomain
A, D
IPR030381Dynamin-type guanine nucleotide-binding (G) domainDomain
A, D
IPR011993PH-like domain superfamilyHomologous Superfamily
A, D
IPR019762Dynamin, GTPase region, conserved siteConserved Site
A, D
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
A, D
IPR003130Dynamin GTPase effectorDomain
A, D
IPR000375Dynamin stalk domainDomain
A, D
IPR022812DynaminFamily
B, E
IPR020850GTPase effector domainDomain
B, E
IPR001401Dynamin, GTPase domainDomain
B, E
IPR045063Dynamin, N-terminalDomain
B, E
IPR030381Dynamin-type guanine nucleotide-binding (G) domainDomain
B, E
IPR019762Dynamin, GTPase region, conserved siteConserved Site
B, E
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B, E
IPR003130Dynamin GTPase effectorDomain
B, E
IPR000375Dynamin stalk domainDomain
B, E
IPR022812DynaminFamily
C, F
IPR020850GTPase effector domainDomain
C, F
IPR001849Pleckstrin homology domainDomain
C, F
IPR001401Dynamin, GTPase domainDomain
C, F
IPR045063Dynamin, N-terminalDomain
C, F
IPR030381Dynamin-type guanine nucleotide-binding (G) domainDomain
C, F
IPR011993PH-like domain superfamilyHomologous Superfamily
C, F
IPR019762Dynamin, GTPase region, conserved siteConserved Site
C, F
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
C, F
IPR003130Dynamin GTPase effectorDomain
C, F
IPR000375Dynamin stalk domainDomain
C, F
IPR022812DynaminFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, D
PharosQ05193
B, E
PharosP20591
C, F
PharosQ05193