3MDY
Crystal structure of the cytoplasmic domain of the bone morphogenetic protein receptor type-1B (BMPR1B) in complex with FKBP12 and LDN-193189
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth C] | SCOP2B Superfamily | Protein kinase-like (PK-like) | 8080451 | 3000066 | SCOP2B (2022-06-29) |
A | SCOP2 Family | Protein kinases catalytic domain-like | 8080450 | 4003661 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Protein kinase-like (PK-like) | 8080451 | 3000066 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Rotamase-like | 8035974 | 3000622 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Rotamase-like | 8035974 | 3000622 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth C] | Pkinase_Tyr | e3mdyC1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
A | Pkinase_Tyr | e3mdyA1 | A: a+b complex topology | X: Protein kinase/SAICAR synthase/ATP-grasp (From Homology) | H: Protein kinase/SAICAR synthase/ATP-grasp | T: Protein kinase | F: Pkinase_Tyr | ECOD (1.6) |
D | FKBP_C | e3mdyD1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: FKBP_C | ECOD (1.6) |
C [auth B] | FKBP_C | e3mdyB1 | A: a+b two layers | X: FKBP-like | H: FKBP-like | T: FKBP-like | F: FKBP_C | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth C] | 3.30.200.20 | Alpha Beta | 2-Layer Sandwich | Phosphorylase Kinase | domain 1 | CATH (4.3.0) |
B [auth C] | 1.10.510.10 | Mainly Alpha | Orthogonal Bundle | Transferase(Phosphotransferase) | domain 1 | CATH (4.3.0) |
A | 3.30.200.20 | Alpha Beta | 2-Layer Sandwich | Phosphorylase Kinase | domain 1 | CATH (4.3.0) |
A | 1.10.510.10 | Mainly Alpha | Orthogonal Bundle | Transferase(Phosphotransferase) | domain 1 | CATH (4.3.0) |
D | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
C [auth B] | 3.10.50.40 | Alpha Beta | Roll | Chitinase A | domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF07714 | Protein tyrosine and serine/threonine kinase (PK_Tyr_Ser-Thr) | Protein tyrosine and serine/threonine kinase | Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosph ... | Domain |
A, B [auth C] | PF08515 | Transforming growth factor beta type I GS-motif (TGF_beta_GS) | Transforming growth factor beta type I GS-motif | - | Family |
C [auth B], D | PF00254 | FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C) | FKBP-type peptidyl-prolyl cis-trans isomerase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR000472 | Activin types I and II receptor domain | Domain |
A, B [auth C] | IPR017441 | Protein kinase, ATP binding site | Binding Site |
A, B [auth C] | IPR045860 | Snake toxin-like superfamily | Homologous Superfamily |
A, B [auth C] | IPR000719 | Protein kinase domain | Domain |
A, B [auth C] | IPR001245 | Serine-threonine/tyrosine-protein kinase, catalytic domain | Domain |
A, B [auth C] | IPR003605 | GS domain | Domain |
A, B [auth C] | IPR011009 | Protein kinase-like domain superfamily | Homologous Superfamily |
A, B [auth C] | IPR008271 | Serine/threonine-protein kinase, active site | Active Site |
A, B [auth C] | IPR000333 | Ser/Thr protein kinase, TGFB receptor | Family |
C [auth B], D | IPR046357 | Peptidyl-prolyl cis-trans isomerase domain superfamily | Homologous Superfamily |
C [auth B], D | IPR050689 | FKBP-type Peptidyl-prolyl cis-trans Isomerase | Family |
C [auth B], D | IPR001179 | FKBP-type peptidyl-prolyl cis-trans isomerase domain | Domain |