3IVF
Crystal structure of the talin head FERM domain
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ubiquitin-like | 8091437 | 3000157 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | PH domain-like | 8044255 | 3000134 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | FERM central domain-like | 8044254 | 3001227 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | IRS_1 | e3ivfA2 | A: beta barrels | X: PH domain-like | H: PH domain-like (From Topology) | T: PH domain-like | F: IRS_1 | ECOD (1.6) |
A | FERM_M | e3ivfA1 | A: alpha bundles | X: Acyl-CoA binding protein-like (From Topology) | H: Acyl-CoA binding protein-like (From Topology) | T: Acyl-CoA binding protein-like | F: FERM_M | ECOD (1.6) |
A | FERM_N | e3ivfA4 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: FERM_N | ECOD (1.6) |
A | FERM_f0 | e3ivfA5 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: FERM_f0 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.10.20.90 | Alpha Beta | Roll | Ubiquitin-like (UB roll) | Phosphatidylinositol 3-kinase Catalytic Subunit | CATH (4.3.0) |
A | 1.20.80.10 | Mainly Alpha | Up-down Bundle | Acyl-CoA Binding Protein | CATH (4.3.0) | |
A | 2.30.29.30 | Mainly Beta | Roll | PH-domain like | Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02174 | PTB domain (IRS-1 type) (IRS) | PTB domain (IRS-1 type) | Domain | ||
PF00373 | FERM central domain (FERM_M) | FERM central domain | This domain is the central structural domain of the FERM domain. | Domain | |
PF16511 | N-terminal or F0 domain of Talin-head FERM (FERM_f0) | N-terminal or F0 domain of Talin-head FERM | FERM_f0 forms a stable globular structure. The fold is an ubiquitin-like fold joined to the f1 domain in a novel fixed orientation by an extensive charged interface. It is required for maximal integrin-activation, by interacting with other FA compon ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR000299 | FERM domain | Domain | |
IPR002404 | IRS-type PTB domain | Domain | |
IPR014352 | FERM/acyl-CoA-binding protein superfamily | Homologous Superfamily | |
IPR019748 | FERM central domain | Domain | |
IPR015009 | Vinculin-binding site-containing domain | Domain | |
IPR032425 | Talin, N-terminal F0 domain | Domain | |
IPR011993 | PH-like domain superfamily | Homologous Superfamily | |
IPR035964 | I/LWEQ domain superfamily | Homologous Superfamily | |
IPR015224 | Talin, central | Domain | |
IPR054082 | Talin, IBS2B domain | Domain | |
IPR019749 | Band 4.1 domain | Domain | |
IPR035963 | FERM superfamily, second domain | Homologous Superfamily | |
IPR036476 | Talin, central domain superfamily | Homologous Superfamily | |
IPR036723 | Alpha-catenin/vinculin-like superfamily | Homologous Superfamily | |
IPR002558 | I/LWEQ domain | Domain | |
IPR019747 | FERM conserved site | Conserved Site | |
IPR054060 | Talin 1-like, rod-segment domain | Domain | |
IPR049108 | Talin, R4 domain | Domain | |
IPR029071 | Ubiquitin-like domain superfamily | Homologous Superfamily | |
IPR037438 | Talin-1/2, rod-segment | Domain |