Annotations: 1KC8


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Jd1kc8j_ Alpha and beta proteins (a+b) alpha/beta-Hammerhead Ribosomal protein L16p/L10e Ribosomal protein L10e Ribosomal protein L10e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Kd1kc8k_ Alpha and beta proteins (a/b) Ribosomal protein L13 Ribosomal protein L13 Ribosomal protein L13 Ribosomal protein L13 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Ld1kc8l_ All beta proteins Ribosomal protein L14 Ribosomal protein L14 Ribosomal protein L14 Ribosomal protein L14 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Md1kc8m_ Alpha and beta proteins (a/b) Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal protein L15 (L15p) (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Nd1kc8n_ Alpha and beta proteins (a+b) Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e L15e Ribosomal protein L15e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Od1kc8o_ Alpha and beta proteins (a/b) Ribonuclease H-like motif Translational machinery components Ribosomal protein L18 and S11 Ribosomal protein L18 (L18p) (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Pd1kc8p_ Alpha and beta proteins (a/b) Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal proteins L15p and L18e Ribosomal protein L18e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Qd1kc8q_ All alpha proteins Ribosomal protein L19 (L19e) Ribosomal protein L19 (L19e) Ribosomal protein L19 (L19e) Ribosomal protein L19 (L19e) (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Rd1kc8r_ All beta proteins SH3-like barrel Translation proteins SH3-like domain Ribosomal proteins L24p and L21e Ribosomal proteins L21e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Sd1kc8s_ Alpha and beta proteins (a+b) Ribosomal protein L22 Ribosomal protein L22 Ribosomal protein L22 Ribosomal protein L22 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Td1kc8t_ Alpha and beta proteins (a+b) Ribosomal proteins S24e, L23 and L15e Ribosomal proteins S24e, L23 and L15e L23p Ribosomal protein L23 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Ud1kc8u_ All beta proteins SH3-like barrel Translation proteins SH3-like domain Ribosomal proteins L24p and L21e Ribosomal proteins L24 (L24p) (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Vd1kc8v_ Small proteins Glucocorticoid receptor-like (DNA-binding domain) Glucocorticoid receptor-like (DNA-binding domain) Ribosomal protein L24e Ribosomal protein L24e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Wd1kc8w_ All alpha proteins Long alpha-hairpin Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p) Ribosomal protein L29 (L29p) (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Xd1kc8x_ Alpha and beta proteins (a+b) Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Ribosomal protein L30p/L7e Archaeal L30 (L30a) (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Yd1kc8y_ Alpha and beta proteins (a+b) Ribosomal protein L31e Ribosomal protein L31e Ribosomal protein L31e Ribosomal protein L31e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Zd1kc8z_ Alpha and beta proteins (a/b) Barstar-like Ribosomal protein L32e Ribosomal protein L32e Ribosomal protein L32e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
AA [auth 1]d1kc81_ Small proteins Rubredoxin-like Zn-binding ribosomal proteins Ribosomal protein L37ae Ribosomal protein L37ae (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
BA [auth 2]d1kc82_ Small proteins Rubredoxin-like Zn-binding ribosomal proteins Ribosomal protein L37e Ribosomal protein L37e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
CA [auth 3]d1kc83_ All alpha proteins Non-globular all-alpha subunits of globular proteins Ribosomal protein L39e Ribosomal protein L39e Ribosomal protein L39e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Cd1kc8c1 All beta proteins SH3-like barrel Translation proteins SH3-like domain C-terminal domain of ribosomal protein L2 C-terminal domain of ribosomal protein L2 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Cd1kc8c2 All beta proteins OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like N-terminal domain of ribosomal protein L2 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
DA [auth 4]d1kc84_ Small proteins Rubredoxin-like Zn-binding ribosomal proteins Ribosomal protein L44e Ribosomal protein L44e (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Dd1kc8d_ All beta proteins Reductase/isomerase/elongation factor common domain Translation proteins Ribosomal protein L3 Ribosomal protein L3 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Ed1kc8e_ Alpha and beta proteins (a/b) Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 Ribosomal protein L4 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Fd1kc8f_ Alpha and beta proteins (a+b) RL5-like RL5-like Ribosomal protein L5 Ribosomal protein L5 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Gd1kc8g1 Alpha and beta proteins (a+b) Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6 Ribosomal protein L6 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Hd1kc8h_ Alpha and beta proteins (a+b) Bacillus chorismate mutase-like L30e-like L30e/L7ae ribosomal proteins Ribosomal protein L7ae (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)
Id1kc8i_ Peptides Ribosomal protein L10 Ribosomal protein L10 Ribosomal protein L10 Ribosomal protein L10 (Haloarcula marismortui ) [TaxId: 2238 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
JSCOP2B SuperfamilyRibosomal protein L16p/L10e 8035022 3000884 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyRibosomal protein L13 8032632 3001134 SCOP2B (2022-06-29)
LSCOP2B Superfamily50S Ribosomal protein L14-like 8034442 3000433 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyRibosomal proteins L15p and L18e 8032635 3001045 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8032636 3000210 SCOP2B (2022-06-29)
OSCOP2B SuperfamilyTranslational machinery components 8032638 3000571 SCOP2B (2022-06-29)
PSCOP2B SuperfamilyRibosomal proteins L15p and L18e 8032640 3001045 SCOP2B (2022-06-29)
QSCOP2B SuperfamilyRibosomal protein L19 (L19e) 8032641 3000890 SCOP2B (2022-06-29)
RSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8032644 3000334 SCOP2B (2022-06-29)
SSCOP2B SuperfamilyRibosomal protein L22 8032645 3001078 SCOP2B (2022-06-29)
TSCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8032646 3000210 SCOP2B (2022-06-29)
USCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8032648 3000334 SCOP2B (2022-06-29)
VSCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8032651 3000068 SCOP2B (2022-06-29)
WSCOP2B SuperfamilyRibosomal protein L29 (L29p) 8032653 3000713 SCOP2B (2022-06-29)
XSCOP2B SuperfamilyRibosomal protein L30p/L7e 8032657 3001378 SCOP2B (2022-06-29)
YSCOP2B SuperfamilyRibosomal protein L31e 8032659 3000699 SCOP2B (2022-06-29)
ZSCOP2B SuperfamilyRibosomal protein L32e 8032660 3000982 SCOP2B (2022-06-29)
AA [auth 1]SCOP2B SuperfamilyZn-binding ribosomal proteins 8032661 3001320 SCOP2B (2022-06-29)
BA [auth 2]SCOP2B SuperfamilyZn-binding ribosomal proteins 8032609 3001320 SCOP2B (2022-06-29)
CA [auth 3]SCOP2B SuperfamilyRibosomal protein L39e 8034428 3001756 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNucleic acid-binding proteins 8032613 3000135 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8032612 3000334 SCOP2B (2022-06-29)
DA [auth 4]SCOP2B SuperfamilyZn-binding ribosomal proteins 8032610 3001320 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyTranslational proteins 8032615 3000811 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibosomal protein L4 8032619 3001146 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRL5-like 8032620 3001709 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRibosomal protein L6 8032625 3000724 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyRibosomal protein L6 8032623 3000724 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyL30e-like 8032628 3001739 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
JRibosomal_L16e1kc8J1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
KRibosomal_L13e1kc8K1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
LRibosomal_L14e1kc8L1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
MRibosomal_L18e1kc8M1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
NRibosomal_L15ee1kc8N1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L15eECOD (1.6)
ORibosomal_L5ee1kc8O1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L5eECOD (1.6)
PRibosomal_L18e1kc8P1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L18ECOD (1.6)
QRibosomal_L19e_Ne1kc8Q1 A: alpha arraysX: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) N-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) N-terminal domainF: Ribosomal_L19e_NECOD (1.6)
QRibosomal_L19e_Ce1kc8Q2 A: alpha bundlesX: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)H: Ribosomal protein L19 (L19e) C-terminal domain (From Topology)T: Ribosomal protein L19 (L19e) C-terminal domainF: Ribosomal_L19e_CECOD (1.6)
RRibosomal_L21ee1kc8R1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L21eECOD (1.6)
SRibosomal_L22e1kc8S1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
TRibosomal_L23_1e1kc8T1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_1ECOD (1.6)
URibosomal_L26e1kc8U1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L26ECOD (1.6)
VRibosomal_L24ee1kc8V1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_L24eECOD (1.6)
WRibosomal_L29e1kc8W1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
XRibosomal_L30_1e1kc8X1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30_1ECOD (1.6)
YRibosomal_L31ee1kc8Y1 A: a+b two layersX: Ribosomal protein L31e-likeH: Ribosomal protein L31e/gp120 outer domain (From Topology)T: Ribosomal protein L31e/gp120 outer domainF: Ribosomal_L31eECOD (1.6)
ZRibosomal_L32ee1kc8Z1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L32e (From Topology)T: Ribosomal protein L32eF: Ribosomal_L32eECOD (1.6)
AA [auth 1]Ribosomal_L37aee1kc811 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37aeECOD (1.6)
BA [auth 2]Ribosomal_L37ee1kc821 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L37eECOD (1.6)
CA [auth 3]Ribosomal_L39e1kc831 A: extended segmentsX: Ribosomal protein L39e (From Topology)H: Ribosomal protein L39e (From Topology)T: Ribosomal protein L39eF: Ribosomal_L39ECOD (1.6)
CRibosomal_L2_1e1kc8C1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
CRibosomal_L2_C_2e1kc8C2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_C_2ECOD (1.6)
DA [auth 4]Ribosomal_L44e1kc841 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L44ECOD (1.6)
DRibosomal_L3e1kc8D1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
ERibosomal_L4e1kc8E1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
FRibosomal_L5_Ce1kc8F1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
GRibosomal_L6_2e1kc8G2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_2ECOD (1.6)
GRibosomal_L6e1kc8G1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
HRibosomal_L7Ae_1e1kc8H1 A: a+b three layersX: Bacillus chorismate mutase-likeH: L30e-like (From Topology)T: L30e-likeF: Ribosomal_L7Ae_1ECOD (1.6)
IrplP0_likee1kc8I1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein L10-like (From Topology)T: Ribosomal protein L10-likeF: rplP0_likeECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
J3.90.1170.10 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase domain 3CATH (4.3.0)
K3.90.1180.10 Alpha Beta Alpha-Beta Complex Ribosomal Protein L13p Chain: ACATH (4.3.0)
L2.40.150.20 Mainly Beta Beta Barrel Ribosomal Protein L14 Ribosomal protein L14/L23CATH (4.3.0)
M4.10.990.10 Few Secondary Structures Irregular Molecule: Ribosomal Protein L15 Chain: KCATH (4.3.0)
M3.100.10.10 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (4.3.0)
N3.40.1120.10 Alpha Beta 3-Layer(aba) Sandwich Ribosomal protein L15e Ribosomal protein L15CATH (4.3.0)
O3.30.420.100 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
P3.100.10.10 Alpha Beta Ribosomal Protein L15 Chain: K domain 2CATH (4.3.0)
Q1.10.1650.10 Mainly Alpha Orthogonal Bundle 50s Ribosomal Protein L19e, Chain O, domain 1 CATH (4.3.0)
Q1.10.1200.60 Mainly Alpha Orthogonal Bundle Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein Chain ACATH (4.3.0)
Q1.20.5.560 Mainly Alpha Up-down Bundle Single alpha-helices involved in coiled-coils or other helix-helix interfaces Single Heli x binCATH (4.3.0)
R2.30.30.70 Mainly Beta Roll SH3 type barrels. Ribosomal protein L21CATH (4.3.0)
S3.90.470.10 Alpha Beta Alpha-Beta Complex Ribosomal Protein L22 Chain ACATH (4.3.0)
T3.30.70.330 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits RRM (RNA recognition motif) domainCATH (4.3.0)
U2.30.30.30 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
V2.30.170.20 Mainly Beta Roll Ribosomal Protein L24e Chain: TCATH (4.3.0)
W1.10.287.310 Mainly Alpha Orthogonal Bundle Helix Hairpins CATH (4.3.0)
X3.30.1390.20 Alpha Beta 2-Layer Sandwich Ribosomal Protein L30 Chain: A,CATH (4.3.0)
X1.10.15.30 Mainly Alpha Orthogonal Bundle 3-methyladenine DNA Glycosylase II Chain A, domain 3CATH (4.3.0)
Y3.10.440.10 Alpha Beta Roll Ribosomal Protein L31e Chain: WCATH (4.3.0)
AA [auth 1]2.20.25.30 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
BA [auth 2]2.20.25.30 Mainly Beta Single Sheet N-terminal domain of TfIIb CATH (4.3.0)
CA [auth 3]1.10.1620.10 Mainly Alpha Orthogonal Bundle Atp Synthase Epsilon Chain Chain: ICATH (4.3.0)
C2.30.30.30 Mainly Beta Roll SH3 type barrels. CATH (4.3.0)
C2.40.50.140 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) Nucleic acid-binding proteinsCATH (4.3.0)
C4.10.950.10 Few Secondary Structures Irregular Ribosomal protein L2 domain 3CATH (4.3.0)
DA [auth 4]3.10.450.80 Alpha Beta Roll Nuclear Transport Factor 2 Chain: A,CATH (4.3.0)
D2.40.30.10 Mainly Beta Beta Barrel Elongation Factor Tu (Ef-tu) domain 3CATH (4.3.0)
D3.30.1430.10 Alpha Beta 2-Layer Sandwich Ribosomal Protein L3 Chain: BCATH (4.3.0)
D4.10.960.10 Few Secondary Structures Irregular Ribosomal protein L3 domain 3CATH (4.3.0)
E3.40.1370.10 Alpha Beta 3-Layer(aba) Sandwich Ribosomal Protein L4 Chain: ACATH (4.3.0)
F3.30.1440.10 Alpha Beta 2-Layer Sandwich 50s Ribosomal Protein L5 Chain: A,CATH (4.3.0)
G3.90.930.12 Alpha Beta Alpha-Beta Complex Outer Surface Protein A domain 3CATH (4.3.0)
H3.30.1330.30 Alpha Beta 2-Layer Sandwich 60s Ribosomal Protein L30 Chain: ACATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
PF01280Ribosomal protein L19e (Ribosomal_L19e)Ribosomal protein L19e- Family
PF01157Ribosomal protein L21e (Ribosomal_L21e)Ribosomal protein L21e- Family
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
PF00467KOW motif (KOW)KOW motif- Family
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
AA [auth 1]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
BA [auth 2]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
CA [auth 3]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth 4]PF00935Ribosomal protein L44 (Ribosomal_L44)Ribosomal protein L44- Family
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6- Domain
PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
23S RRNA---
RIBOSOMAL PROTEIN L10E
RIBOSOMAL PROTEIN L13
RIBOSOMAL PROTEIN L14
RIBOSOMAL PROTEIN L15
RIBOSOMAL PROTEIN L15E
RIBOSOMAL PROTEIN L18
RIBOSOMAL PROTEIN L18E
RIBOSOMAL PROTEIN L19E
RIBOSOMAL PROTEIN L21E
RIBOSOMAL PROTEIN L22
5S RRNA---
RIBOSOMAL PROTEIN L23
RIBOSOMAL PROTEIN L24
RIBOSOMAL PROTEIN L24E
RIBOSOMAL PROTEIN L29
RIBOSOMAL PROTEIN L30
RIBOSOMAL PROTEIN L31E
RIBOSOMAL PROTEIN L32E
AA [auth 1]RIBOSOMAL PROTEIN L37Ae
BA [auth 2]RIBOSOMAL PROTEIN L37E
CA [auth 3]RIBOSOMAL PROTEIN L39E
RIBOSOMAL PROTEIN L2
DA [auth 4]RIBOSOMAL PROTEIN L44E
RIBOSOMAL PROTEIN L3
RIBOSOMAL PROTEIN L4
RIBOSOMAL PROTEIN L5
RIBOSOMAL PROTEIN L6
RIBOSOMAL PROTEIN L7AE
RIBOSOMAL PROTEIN L10

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
IPR022981Large ribosomal subunit protein uL16, archaeaFamily
IPR001197Large ribosomal subunit protein uL16, eukaryotes/archaeaFamily
IPR016180Large ribosomal subunit protein uL16 domainDomain
IPR047873Large ribosomal subunit protein uL16Family
IPR018255Large ribosomal subunit protein uL16, conserved site, eukaryotes/archaeaConserved Site
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IPR005822Large ribosomal subunit protein uL13Family
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
IPR019971Large ribosomal subunit protein uL14, archaealFamily
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
IPR000218Large ribosomal subunit protein uL14Family
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
IPR027386Ribosomal uL15, N-terminalHomologous Superfamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR030878Large ribosomal subunit protein uL15Family
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
IPR020926Large ribosomal subunit protein eL15, archaealFamily
IPR000439Large ribosomal subunit protein eL15Family
IPR005485Large ribosomal subunit protein uL18 eukaryotic/archaealFamily
IPR022947Large ribosomal subunit protein eL18, archaeaFamily
IPR021131Large ribosomal subunit protein uL15/eL18Domain
IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
IPR000039Large ribosomal subunit protein eL18Family
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
IPR015974Large ribosomal subunit protein eL19, domain 3Homologous Superfamily
IPR039547Large ribosomal subunit protein eL19Family
IPR033936Large ribosomal subunit protein eL19, archaealDomain
IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
IPR000196Large ribosomal subunit protein eL19 domainDomain
IPR015973Large ribosomal subunit protein eL19, domain 2Homologous Superfamily
IPR022856Large ribosomal subunit protein eL21, archaealFamily
IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
IPR001147Large ribosomal subunit protein eL21Family
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
IPR001063Large ribosomal subunit protein uL22Family
IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
IPR019985Large ribosomal subunit protein uL23Family
IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
IPR013025Large ribosomal subunit protein uL23-likeFamily
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR005824KOWDomain
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
IPR023438Ribosomal_eL24Unknown
IPR011017TRASH domainDomain
IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
IPR023442Large ribosomal subunit protein eL24, conserved siteConserved Site
IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
IPR050063Universal ribosomal protein uL29Family
IPR001854Large ribosomal subunit protein uL29Family
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
IPR039699Large ribosomal subunit protein uL30Family
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
IPR005997Large ribosomal subunit protein uL30, archaealFamily
IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
IPR000054Large ribosomal subunit protein eL31Family
IPR001515Large ribosomal subunit protein eL32Family
IPR018263Large ribosomal subunit protein eL32, conserved siteConserved Site
IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
IPR023654Large ribosomal subunit protein eL32, archaealFamily
IPR010995DNA repair Rad51/transcription factor NusA, alpha-helicalHomologous Superfamily
IPR003583Helix-hairpin-helix DNA-binding motif, class 1Domain
AA [auth 1]IPR002674Large ribosomal subunit protein eL43Family
AA [auth 1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth 1]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
AA [auth 1]IPR050522Eukaryotic ribosomal protein eL43Family
BA [auth 2]IPR001569Large ribosomal subunit protein eL37Family
BA [auth 2]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
BA [auth 2]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth 2]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
CA [auth 3]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
CA [auth 3]IPR000077Large ribosomal subunit protein eL39Family
CA [auth 3]IPR020083Large ribosomal subunit protein eL39, conserved siteConserved Site
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR023672Large ribosomal subunit protein uL2, archaeal-typeFamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
DA [auth 4]IPR053708Eukaryotic Ribosomal Large Subunit eL42Homologous Superfamily
DA [auth 4]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
DA [auth 4]IPR000552Large ribosomal subunit protein eL42Family
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR019928Large ribosomal subunit protein uL3, archaealFamily
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR019970Large ribosomal subunit protein uL4, archaeaFamily
IPR002136Large ribosomal subunit protein uL4Family
IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
IPR022804Large ribosomal subunit protein uL5, archaealFamily
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
IPR002132Large ribosomal subunit protein uL5Family
IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
IPR019907Large ribosomal subunit protein uL6, archaeaFamily
IPR002359Large ribosomal subunit protein uL6, conserved site-2Conserved Site
IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
IPR000702Large ribosomal subunit protein uL6-likeFamily
IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
IPR022481Large ribosomal subunit protein eL8, archaeaFamily
IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
IPR018492Ribosomal protein eL8/Nhp2 familyFamily
IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
IPR001790Large ribosomal subunit protein uL10Family
IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
IPR050323Universal ribosomal protein uL10Family
IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
IPR022909Large ribosomal subunit protein uL10, archaeaFamily